Miyakogusa Predicted Gene
- Lj4g3v2363080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2363080.1 Non Chatacterized Hit- tr|K3YIW0|K3YIW0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014179,32.11,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Mitochondrial termination factor
repeats,Mitochodri,CUFF.50803.1
(628 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr... 739 0.0
gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Ch... 718 0.0
gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Ch... 161 6e-39
gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chr... 119 2e-26
>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 1406
Score = 739 bits (373), Expect = 0.0
Identities = 562/625 (89%)
Strand = Plus / Plus
Query: 4 gcttgtgcactttttggttccattaccattagtcttgctctcatgaaatcaaaagtacaa 63
||||||| ||| |||||||||| ||||||| | ||| || |||||||||||||||| ||
Sbjct: 573 gcttgtgtactatttggttccaataccattgttattgatcgcatgaaatcaaaagtaaaa 632
Query: 64 ttgttgcttgatatgggagtcactccctcaaacatataccttttgcttagaacttggccc 123
||||||||| |||||||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 633 ttgttgcttaatatgggagtgactccctcaaacatccaccagttgcttactacttggccc 692
Query: 124 tctctgctcagatgtgctgacttgaaggaggttgtggaggaagtcaagggattgggattt 183
||| |||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 693 tctgtgctcaaatgtgctgacttgacggaggctgtggtggaagtcaagggattgggattt 752
Query: 184 catccctccaaaacgctttttgttgtagcgttacaggccaaaaggggtatatccaaatct 243
|||||||||||| ||| ||||||| ||| |||| || |||||||||||||||||||||
Sbjct: 753 catccctccaaatcgcattttgtttcagcattacgggtcaaaaggggtatatccaaatcg 812
Query: 244 ctttgggatgccaaagtcgatgcctttaagacatggggctggtctgaagatgctattctg 303
| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 813 ccttgggatgccaaactcgatgcctttaagacatggggctgccctgaagatgctattctg 872
Query: 304 gatgcatttaggaggaatcccaagattatgctatactcaatcaaaaaagtaaatgcagtg 363
||||||||||||||| ||||| | || ||||||||||||||||||||||| |||||||||
Sbjct: 873 gatgcatttaggaggtatccccacatgatgctatactcaatcaaaaaagttaatgcagtg 932
Query: 364 atgagtttttgggtaggtcatcttggttgggacccttcagtacttcaagccgtgccatca 423
|||||||||||||| | ||||||||||||||||||||||| |||| |||||||||| ||
Sbjct: 933 atgagtttttgggtcgtccatcttggttgggacccttcagtgcttctagccgtgccaaca 992
Query: 424 ctttttggatatagtttggagaaaaggcttatgccaagggcttcagttgtccagtatctt 483
|||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 993 cttttttcattaagtttggagaaaaggcttatcccaagggcttcagttgtccagtatctt 1052
Query: 484 ctctccagaggtttgatgaagaaggatgctagcttatatacaccgtttaagtatactgat 543
||||||||||| |||||||||||||||||||||||| |||||| |||| | ||||||
Sbjct: 1053 ctctccagaggattgatgaagaaggatgctagcttaagtacaccatttatatgtactgac 1112
Query: 544 aagttgttcctgcaagaatttgtgaattgttttgaggaggaggaaacatctaagctacta 603
||| |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1113 aagctgttccagcaaaaatttgtgaattgttttgaggaggaggaagcatctaagctacta 1172
Query: 604 agtctatatcggggaggacgctagc 628
|||||||||||||||||| ||||||
Sbjct: 1173 agtctatatcggggaggaagctagc 1197
>gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 544
Score = 718 bits (362), Expect = 0.0
Identities = 485/526 (92%)
Strand = Plus / Plus
Query: 45 catgaaatcaaaagtacaattgttgcttgatatgggagtcactccctcaaacatatacct 104
|||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 15 catgaaatcaaaagtaaaattgttgcttcatatgggagtgcctccctcaaacatatacct 74
Query: 105 tttgcttagaacttggccctctctgctcagatgtgctgacttgaaggaggttgtggagga 164
||||||||||||| ||||| || | |||||||||||||||||||| |||| |||||||||
Sbjct: 75 tttgcttagaactaggcccactatactcagatgtgctgacttgaacgaggctgtggagga 134
Query: 165 agtcaagggattgggatttcatccctccaaaacgctttttgttgtagcgttacaggccaa 224
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 135 agtcaagggattgggatttcatccctccaaatcgcattttgttgtagcgttacaggccaa 194
Query: 225 aaggggtatatccaaatctctttgggatgccaaagtcgatgcctttaagacatggggctg 284
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 195 aaggggtatatccaaatcactttgggatgccaaagtcgatgcctttaagacatgtggctg 254
Query: 285 gtctgaagatgctattctggatgcatttaggaggaatcccaagattatgctatactcaat 344
|||||||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||
Sbjct: 255 gtctgaagatgctattttggatgcatttaggaggaatccccacattatgctatgctcaat 314
Query: 345 caaaaaagtaaatgcagtgatgagtttttgggtaggtcatcttggttgggacccttcagt 404
||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct: 315 caaaaaagttaatgcagtgatgagtttttgggtcggccgtcttggttgggacccttcagt 374
Query: 405 acttcaagccgtgccatcactttttggatatagtttggagaaaaggcttatgccaagggc 464
|||| ||||||||||||||||||| || |||||||||||||||||||| ||||||||
Sbjct: 375 gcttctagccgtgccatcacttttttcattaagtttggagaaaaggcttatcccaagggc 434
Query: 465 ttcagttgtccagtatcttctctccagaggtttgatgaagaaggatgctagcttatatac 524
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 435 ttcagttgtccagtatcttctctccagaggattgatgaagaaggatgctagcttaagtac 494
Query: 525 accgtttaagtatactgataagttgttcctgcaagaatttgtgaat 570
||| |||| | |||||| |||| ||||||||| | |||||||||
Sbjct: 495 accatttatatgtactgagaagtatttcctgcaaaagtttgtgaat 540
>gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 573
Score = 161 bits (81), Expect = 6e-39
Identities = 165/193 (85%)
Strand = Plus / Minus
Query: 427 tttggatatagtttggagaaaaggcttatgccaagggcttcagttgtccagtatcttctc 486
||||||||||| |||||||| ||| |||| |||||||||||||||||| |||||||||||
Sbjct: 398 tttggatatagcttggagaagaggattattccaagggcttcagttgtcaagtatcttctc 339
Query: 487 tccagaggtttgatgaagaaggatgctagcttatatacaccgtttaagtatactgataag 546
|| | |||||||||||||||||| ||||||||| |||||| ||| | |||||| ||
Sbjct: 338 tctaaaggtttgatgaagaaggaagctagcttaactacaccatttggtttgactgatgag 279
Query: 547 ttgttcctgcaagaatttgtgaattgttttgaggaggaggaaacatctaagctactaagt 606
||||||||||| | || ||||| ||||||||| ||||||||||||||| ||| |||||
Sbjct: 278 ctgttcctgcaaaagttcgtgaactgttttgagaaggaggaaacatctaggctgctaagg 219
Query: 607 ctatatcggggag 619
|| |||| |||||
Sbjct: 218 ctgtatcagggag 206
>gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 482
Score = 119 bits (60), Expect = 2e-26
Identities = 141/168 (83%)
Strand = Plus / Plus
Query: 425 tttttggatatagtttggagaaaaggcttatgccaagggcttcagttgtccagtatcttc 484
||||||||| ||||||||||| |||| || | ||||||||||||||||| ||||||||||
Sbjct: 94 tttttggatttagtttggagacaaggattgttccaagggcttcagttgttcagtatcttc 153
Query: 485 tctccagaggtttgatgaagaaggatgctagcttatatacaccgtttaagtatactgata 544
|||| | ||||||||||||||| | |||||| ||| |||||| ||| | |||||||
Sbjct: 154 tctctaaaggtttgatgaagaaaggtgctagtttagttacacctttttgtttgactgata 213
Query: 545 agttgttcctgcaagaatttgtgaattgttttgaggaggaggaaacat 592
||||||||||||| | ||||| | ||||||||| ||| ||||||||
Sbjct: 214 agttgttcctgcagaagtttgttacatgttttgagaagggggaaacat 261