Miyakogusa Predicted Gene
- Lj4g3v2352060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2352060.1 tr|Q66J98|Q66J98_XENLA Wdr5-b-prov protein
OS=Xenopus laevis GN=wdr5 PE=2 SV=1,30.29,9e-18,WD_REPEATS_1,WD40
repeat, conserved site; SUBFAMILY NOT NAMED,NULL; WD40 REPEAT
PROTEIN,NULL; GPROTE,CUFF.50797.1
(744 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75720 similar to UniRef100_A9T1H2 Cluster: WD40 repea... 1451 0.0
gnl|LJGI|TC66509 similar to UniRef100_A7PUB2 Cluster: Chromosome... 90 2e-17
>gnl|LJGI|TC75720 similar to UniRef100_A9T1H2 Cluster: WD40 repeat protein, COMPASS
complex protein; n=1; Physcomitrella patens subsp.
patens|Rep: WD40 repeat protein, COMPASS complex protein
- Physcomitrella patens subsp. patens, partial (87%)
Length = 1267
Score = 1451 bits (732), Expect = 0.0
Identities = 741/744 (99%)
Strand = Plus / Plus
Query: 1 atgcagctctacgagggccacgaccagggcgtctccgacctcgccttctcctccgactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgcagctctacgagggccacgaccagggcgtctccgacctcgccttctcctccgactcc 322
Query: 61 cgcttcctcgtctccgcctccgacgacaaaaccctccgcctctgggacgtccccaccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cgcttcctcgtctccgcctccgacgacaaaaccctccgcctctgggacgtccccaccggc 382
Query: 121 tccctcatcaagacgctccacggccacaccaactacgtcttctgcgtcaatttcaatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tccctcatcaagacgctccacggccacaccaactacgtcttctgcgtcaatttcaatcct 442
Query: 181 cagtccaacatcatcgtctcgggttcgttcgatgagaccgttcgggtctgggatgtgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagtccaacatcatcgtctcgggttcgttcgatgagaccgttcgggtctgggatgtgaag 502
Query: 241 tccgggaagtgcctcaaggttcttcctgctcactccgaccctgtcaccgccgtcgattcc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 503 tccgggaagtgcctcaaggttcttcctgctcactccgaccctgtcaccgccgtcgatttc 562
Query: 301 aaccgcgatggctcactgattgtctccaccagctatgatggtctctgcaggatttgggat 360
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 563 aaccgcgatgggtcactgattgtctccagcagctatgatggtctctgcaggatttgggat 622
Query: 361 gcttccactggacactgtatgaagacgttgattgatgatgagaaccctcctgtttccttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcttccactggacactgtatgaagacgttgattgatgatgagaaccctcctgtttccttt 682
Query: 421 gtcaagttttcacccaatgccaagttcattctcgttggcaccttggacaacaatctgagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtcaagttttcacccaatgccaagttcattctcgttggcaccttggacaacaatctgagg 742
Query: 481 ctttggaactattcgactgggaggtttttgaagacgtacaccggtcatgttaactcaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctttggaactattcgactgggaggtttttgaagacgtacaccggtcatgttaactcaaaa 802
Query: 541 tactgcatttcatcgactttctctacaacaaatgggaagtatgttgttgggggttcagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tactgcatttcatcgactttctctacaacaaatgggaagtatgttgttgggggttcagaa 862
Query: 601 gatcatggtatatacttatgggaactgcagacaaggaaaatagtacagaaattggaaggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gatcatggtatatacttatgggaactgcagacaaggaaaatagtacagaaattggaaggt 922
Query: 661 cattctgatactgttgtatctgtgtcatgtcaccctacagagaacatgattgcttctggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 cattctgatactgttgtatctgtgtcatgtcaccctacagagaacatgattgcttctggt 982
Query: 721 gctcttggcaatgacaaaactgtg 744
||||||||||||||||||||||||
Sbjct: 983 gctcttggcaatgacaaaactgtg 1006
>gnl|LJGI|TC66509 similar to UniRef100_A7PUB2 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1292
Score = 89.7 bits (45), Expect = 2e-17
Identities = 168/209 (80%)
Strand = Plus / Plus
Query: 32 tctccgacctcgccttctcctccgactcccgcttcctcgtctccgcctccgacgacaaaa 91
||||||||||||||| ||||||||||| | || | || |||||||||||| ||| |
Sbjct: 234 tctccgacctcgcctggtcctccgactctcactacatctgctccgcctccgatgaccgca 293
Query: 92 ccctccgcctctgggacgtccccaccggctccctcatcaagacgctccacggccacacca 151
|||||||| ||||||||| | || |||| | | ||||||| |||| |||||||||
Sbjct: 294 ccctccgcatctgggacgccaccggcggcgactgcgtcaagaccctccgcggccacacgc 353
Query: 152 actacgtcttctgcgtcaatttcaatcctcagtccaacatcatcgtctcgggttcgttcg 211
|| || ||||||||||| ||||| ||||||||||| ||||||||| || |||||||
Sbjct: 354 acgcagttttctgcgtcaacttcaaccctcagtccaattacatcgtctctggctcgttcg 413
Query: 212 atgagaccgttcgggtctgggatgtgaag 240
||||||| ||| |||| ||||| ||||||
Sbjct: 414 atgagactgttagggtttgggaggtgaag 442