Miyakogusa Predicted Gene
- Lj4g3v2315770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2315770.1 tr|G7JLH4|G7JLH4_MEDTR Xyloglucan
6-xylosyltransferase OS=Medicago truncatula GN=MTR_4g119880 PE=4
S,92.07,0,FAMILY NOT NAMED,NULL; Glyco_transf_34,Galactosyl
transferase; seg,NULL,CUFF.50782.1
(1350 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63782 homologue to UniRef100_Q5TIN3 Cluster: Alpha-1,... 906 0.0
gnl|LJGI|TC74088 similar to UniRef100_A7NW49 Cluster: Chromosome... 553 e-156
gnl|LJGI|BP078437 homologue to UniRef100_A7PDI4 Cluster: Chromos... 68 2e-10
gnl|LJGI|TC65943 homologue to UniRef100_A7PDI4 Cluster: Chromoso... 68 2e-10
gnl|LJGI|TC57156 homologue to UniRef100_A7PDI4 Cluster: Chromoso... 60 4e-08
>gnl|LJGI|TC63782 homologue to UniRef100_Q5TIN3 Cluster: Alpha-1,6-xylosyltransferase;
n=1; Gossypium raimondii|Rep:
Alpha-1,6-xylosyltransferase - Gossypium raimondii (New
World cotton), partial (35%)
Length = 723
Score = 906 bits (457), Expect = 0.0
Identities = 457/457 (100%)
Strand = Plus / Plus
Query: 894 taagaatcgaccggttttcgaagctgatgatcaatctgctatggtttatttgttggccac 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taagaatcgaccggttttcgaagctgatgatcaatctgctatggtttatttgttggccac 60
Query: 954 agggagggagcaatgggggaagaaggtgtaccttgagaatcattattatttgcacggtta 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agggagggagcaatgggggaagaaggtgtaccttgagaatcattattatttgcacggtta 120
Query: 1014 ctggggcattctggttgatcggtatgaagagatgattgagaattaccaccctggtttcgg 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggggcattctggttgatcggtatgaagagatgattgagaattaccaccctggtttcgg 180
Query: 1074 tgatcatcggtggccgctggtgactcactttgtggggtgcaagccatgtgggaagtttgg 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatcatcggtggccgctggtgactcactttgtggggtgcaagccatgtgggaagtttgg 240
Query: 1134 ggattaccctgttgagaggtgcttgaaacagatggatagagcatacaattttggtgataa 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggattaccctgttgagaggtgcttgaaacagatggatagagcatacaattttggtgataa 300
Query: 1194 ccagatcttgcagatgtatggattcacacacaaatcacttgcgagtcgcagggtgaagag 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagatcttgcagatgtatggattcacacacaaatcacttgcgagtcgcagggtgaagag 360
Query: 1254 agtgaggaatgagtctagtaatccacttgatgtgaaggatgagcttgggttgcttcatcc 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtgaggaatgagtctagtaatccacttgatgtgaaggatgagcttgggttgcttcatcc 420
Query: 1314 tgctttcaaagctatcaagttgccaacttcttcttga 1350
|||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgctttcaaagctatcaagttgccaacttcttcttga 457
>gnl|LJGI|TC74088 similar to UniRef100_A7NW49 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 490
Score = 553 bits (279), Expect = e-156
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 1 atgctggaacggtgcttaggatctcgccgcctccgccagctgcagcgcgcctcgcgccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atgctggaacggtgcttaggatctcgccgcctccgccagctgcagcgcgcctcgcgccgc 271
Query: 61 ggcttcctcaccttcctctgcctcttcctcaccgtcatcatgcttcgcggcaccatcgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggcttcctcaccttcctctgcctcttcctcaccgtcatcatgcttcgcggcaccatcgga 331
Query: 121 gccggcaagttcggaacccccgagcaggacctcgacgagatccgccaccacctcggccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gccggcaagttcggaacccccgagcaggacctcgacgagatccgccaccacctcggccgc 391
Query: 181 cgcgtcgagcctcaccgcgtccttgaggaagttcaacccgaaaacaacgaccccaataac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cgcgtcgagcctcaccgcgtccttgaggaagttcaacccgaaaacaacgaccccaataac 451
Query: 241 tacgccaccttcgacatctccaagatcctcgtcgatgaa 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tacgccaccttcgacatctccaagatcctcgtcgatgaa 490
>gnl|LJGI|BP078437 homologue to UniRef100_A7PDI4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 553
Score = 67.9 bits (34), Expect = 2e-10
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 1082 ggtggccgctggtgactcactttgtggggtgcaagccatgtgggaagtttggggattacc 1141
|||||||| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||
Sbjct: 530 ggtggccgttcgtgacgcattttgtcgggtgcaagccttgtgggagctacggggattacc 471
Query: 1142 ctgttgagaggtgcttga 1159
|||| |||||||||||||
Sbjct: 470 ctgtggagaggtgcttga 453
>gnl|LJGI|TC65943 homologue to UniRef100_A7PDI4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 899
Score = 67.9 bits (34), Expect = 2e-10
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 1082 ggtggccgctggtgactcactttgtggggtgcaagccatgtgggaagtttggggattacc 1141
|||||||| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||
Sbjct: 275 ggtggccgttcgtgacgcattttgtcgggtgcaagccttgtgggagctacggggattacc 334
Query: 1142 ctgttgagaggtgcttga 1159
|||| |||||||||||||
Sbjct: 335 ctgtggagaggtgcttga 352
>gnl|LJGI|TC57156 homologue to UniRef100_A7PDI4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 1648
Score = 60.0 bits (30), Expect = 4e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1082 ggtggccgctggtgactcactttgtggggtgcaagccatgtgggaagtttggggattacc 1141
|||||||| | ||||| || ||||||||||||||||| ||||||| | || |||||||
Sbjct: 1241 ggtggccgtttgtgacgcattttgtggggtgcaagccctgtgggagctacggagattacc 1300
Query: 1142 ctgttgagaggtgc 1155
||||||||| ||||
Sbjct: 1301 ctgttgagaagtgc 1314
Score = 54.0 bits (27), Expect = 2e-06
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 611 tgctgtctcaccctgaggttgagtttctatggtggatggacagtgatgccatgttcactg 670
||||||| ||||||||||| |||| | ||||||||||| |||||||| | |||||||
Sbjct: 770 tgctgtcacaccctgaggtggagtggatttggtggatggatagtgatgcttttttcactg 829
Query: 671 atatggcgtttgaggttcc 689
| |||| ||||||| ||||
Sbjct: 830 acatggtgtttgagcttcc 848