Miyakogusa Predicted Gene
- Lj4g3v2314750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2314750.1 tr|B9HXV1|B9HXV1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1089189 PE=4
SV=1,45.38,6e-18,seg,NULL,CUFF.50778.1
(2110 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP063926 weakly similar to UniRef100_A6ZUH0 Cluster: Nu... 880 0.0
gnl|LJGI|BW630720 similar to UniRef100_A7Q0A2 Cluster: Chromosom... 866 0.0
>gnl|LJGI|BP063926 weakly similar to UniRef100_A6ZUH0 Cluster: Nuclear localization
sequence binding protein; n=1; Saccharomyces cerevisiae
YJM789|Rep: Nuclear localization sequence binding
protein - Saccharomyces cerevisiae (strain YJM789)
(Baker's yeast), partial (6%)
Length = 474
Score = 880 bits (444), Expect = 0.0
Identities = 454/456 (99%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 1 atggcttcaaattcagaggctgttgcctccgtcaccggcagcgagggccttcttcaacgt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 20 atggcttcaaattcagaggctgt-gcctccgtcaccggcagcgagggccttcttcaacgt 78
Query: 61 tccttttccattcgagctcctcttaccgttgacgactctgattctgatttcgaagtttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tccttttccattcgagctcctcttaccgttgacgactctgattctgatttcgaagtttca 138
Query: 121 agcgacgccacactctctgacaccgcatctcactccgactccgacgatgacccccaaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agcgacgccacactctctgacaccgcatctcactccgactccgacgatgacccccaaacg 198
Query: 181 caaaaccctccggtagctgaggctgacccagaagcacattatcattcctctgaacaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 caaaaccctccggtagctgaggctgacccagaagcacattatcattcctctgaacaagaa 258
Query: 241 tatgaagaagaagggtcttttgaagctgatgagtactcccctcttgtggaatcacctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tatgaagaagaagggtcttttgaagctgatgagtactcccctcttgtggaatcacctggt 318
Query: 301 tcgcatggtggtgttccattgcgggttgcgccttttgctcaattgtctacctacgacgat 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcgcatggtggtattccattgcgggttgcgccttttgctcaattgtctacctacgacgat 378
Query: 361 gacacgagcagtgatggaatgtctagtgcttcgagaatggcggaggattctgttggtgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gacacgagcagtgatggaatgtctagtgcttcgagaatggcggaggattctgttggtgtg 438
Query: 421 cacaggctcaaggtgcggaacgtggatgatgaagaa 456
||||||||||||||||||||||||||||||||||||
Sbjct: 439 cacaggctcaaggtgcggaacgtggatgatgaagaa 474
>gnl|LJGI|BW630720 similar to UniRef100_A7Q0A2 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 478
Score = 866 bits (437), Expect = 0.0
Identities = 443/445 (99%)
Strand = Plus / Plus
Query: 1666 aggagttcacatggaggaatgaacttagcaaatgatgatgtaaaaagtcaattaatctat 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagttcacatggaggaatgaacttagcaaatgatgatgtaaaaagtcaattaatctat 60
Query: 1726 gttgatggtggtggtgaattagatggcaaagttacattcacttatgctgatgaatctagt 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgatggtggtggtgaattagatggcaaagttacattcacttatgctgatgaatctagt 120
Query: 1786 gttatctttcttaaagatccagcttattttagttcctcaccgcattatgatgctcaaatt 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttatctttcttaaagatccagcttattttagttcctcaccgcattatgatgctcaaatt 180
Query: 1846 gaattccagcacaacagtagtgaacaggaaggggaaacaatacagaagatacagactata 1905
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaattccagcacaacattagtgaacaggaaggggaaacaatacagaagatacagactata 240
Query: 1906 agtgtgaaattcttgaggcttcttcagcgagtaaatttgtcttttgaagattccttggtt 1965
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtgtgaaattcttgaggcttgttcagcgagtaaatttgtcttttgaagattccttggtt 300
Query: 1966 tcaaaagttttatgcaggttggttgcggatatcggaaggcgctcacatcaagaatttgtc 2025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaaaagttttatgcaggttggttgcggatatcggaaggcgctcacatcaagaatttgtc 360
Query: 2026 attagctcagcaaaaatatctgcaatgatgcttgaagaagattgtcaagatgatttagac 2085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attagctcagcaaaaatatctgcaatgatgcttgaagaagattgtcaagatgatttagac 420
Query: 2086 ttttccttgaacattctagttcttg 2110
|||||||||||||||||||||||||
Sbjct: 421 ttttccttgaacattctagttcttg 445