Miyakogusa Predicted Gene

Lj4g3v2313700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2313700.1 tr|G7K983|G7K983_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,78.41,0,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat; PPR:
p,CUFF.50772.1
         (2337 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW614398 weakly similar to UniRef100_A7Q4W0 Cluster: No...   880   0.0  

>gnl|LJGI|BW614398 weakly similar to UniRef100_A7Q4W0 Cluster: Non-specific
           lipid-transfer protein; n=1; Vitis vinifera|Rep:
           Non-specific lipid-transfer protein - Vitis vinifera
           (Grape), partial (5%)
          Length = 488

 Score =  880 bits (444), Expect = 0.0
 Identities = 444/444 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcctcgcagtcgcagggagggaagttggcaagtctagtgcagtcgtgcatcaccaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  atgtcctcgcagtcgcagggagggaagttggcaagtctagtgcagtcgtgcatcaccaag 104

                                                                       
Query: 61  aaagccgtgttacccggtaaagccgtccacgctcgcatcttccgcctcggcctctccggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aaagccgtgttacccggtaaagccgtccacgctcgcatcttccgcctcggcctctccggc 164

                                                                       
Query: 121 gacacctttctctccaaccacctcatcgaactctattccaagtgcgaccgcatcaccact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gacacctttctctccaaccacctcatcgaactctattccaagtgcgaccgcatcaccact 224

                                                                       
Query: 181 gcacaccaagtgttcgatcaaattcctcacaggaacatcttctcatggaacgccattttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gcacaccaagtgttcgatcaaattcctcacaggaacatcttctcatggaacgccattttg 284

                                                                       
Query: 241 tctgctcattgcaaagcccacgacctgccaaacgcgtgccgtttgttcctccaaatgccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tctgctcattgcaaagcccacgacctgccaaacgcgtgccgtttgttcctccaaatgccc 344

                                                                       
Query: 301 gagaggaacaccgtctcgttgaacaccttaatcactgccatggtacgcggtggttaccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gagaggaacaccgtctcgttgaacaccttaatcactgccatggtacgcggtggttaccaa 404

                                                                       
Query: 361 cgccaggcgctcgatacctatgattctttcatgctgcatgatgatggggttggagctaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cgccaggcgctcgatacctatgattctttcatgctgcatgatgatggggttggagctaga 464

                                   
Query: 421 gttagaccctcccacattacattc 444
           ||||||||||||||||||||||||
Sbjct: 465 gttagaccctcccacattacattc 488