Miyakogusa Predicted Gene

Lj4g3v2312410.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2312410.1 Non Chatacterized Hit- tr|K3ZUZ9|K3ZUZ9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si030430,56.25,0.000000000000001,seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Myb_DNA-bind_4,NULL,CUFF.50754.1
         (417 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66713 similar to UniRef100_A7Q5E3 Cluster: Chromosome...   660   0.0  
gnl|LJGI|DC595685 similar to UniRef100_A7Q5E3 Cluster: Chromosom...   438   e-122
gnl|LJGI|DC599909 similar to UniRef100_Q29M22 Cluster: GA13357-P...    52   3e-06

>gnl|LJGI|TC66713 similar to UniRef100_A7Q5E3 Cluster: Chromosome undetermined
           scaffold_53, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (69%)
          Length = 1356

 Score =  660 bits (333), Expect = 0.0
 Identities = 333/333 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaacaaagtagagaaccaagaacatcaccaccctgcatctctcctccccaatatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  atggagaacaaagtagagaaccaagaacatcaccaccctgcatctctcctccccaatatt 129

                                                                       
Query: 61  catagcaccatcacagccaaggaagagtctccaagaaaagccattggtggcggcggcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 catagcaccatcacagccaaggaagagtctccaagaaaagccattggtggcggcggcagt 189

                                                                       
Query: 121 ggtggtggtggtgacaggctgaagagggatgagtggagtgaaggagctgtgtgtacactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggtggtggtggtgacaggctgaagagggatgagtggagtgaaggagctgtgtgtacactt 249

                                                                       
Query: 181 cttgaggcctatgaagccaagtgggtgctcagaaacagagcaaaactcaaaggccaggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cttgaggcctatgaagccaagtgggtgctcagaaacagagcaaaactcaaaggccaggat 309

                                                                       
Query: 241 tgggaagaggttgcaaaacatgtctcttcaagagcaaacaacactaagtcaccaaagaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgggaagaggttgcaaaacatgtctcttcaagagcaaacaacactaagtcaccaaagaca 369

                                            
Query: 301 cagacacagtgcaagaacaagatagagtccatg 333
           |||||||||||||||||||||||||||||||||
Sbjct: 370 cagacacagtgcaagaacaagatagagtccatg 402



 Score =  153 bits (77), Expect = 1e-36
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                       
Query: 341 ggacctgtgtcaccacttccacagccacaaacagcggcaacagcagcaccttctcaatca 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggacctgtgtcaccacttccacagccacaaacagcggcaacagcagcaccttctcaatca 555

                            
Query: 401 ccacaccccagcaataa 417
           |||||||||||||||||
Sbjct: 556 ccacaccccagcaataa 572


>gnl|LJGI|DC595685 similar to UniRef100_A7Q5E3 Cluster: Chromosome undetermined
           scaffold_53, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (13%)
          Length = 360

 Score =  438 bits (221), Expect = e-122
 Identities = 236/241 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaacaaagtagagaaccaagaacatcaccaccctgcatctctcctccccaatatt 60
           |||||||||||||||||||     ||||||||||||||||||||||||||||||||||||
Sbjct: 120 atggagaacaaagtagagaggggggaacatcaccaccctgcatctctcctccccaatatt 179

                                                                       
Query: 61  catagcaccatcacagccaaggaagagtctccaagaaaagccattggtggcggcggcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 catagcaccatcacagccaaggaagagtctccaagaaaagccattggtggcggcggcagt 239

                                                                       
Query: 121 ggtggtggtggtgacaggctgaagagggatgagtggagtgaaggagctgtgtgtacactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggtggtggtggtgacaggctgaagagggatgagtggagtgaaggagctgtgtgtacactt 299

                                                                       
Query: 181 cttgaggcctatgaagccaagtgggtgctcagaaacagagcaaaactcaaaggccaggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cttgaggcctatgaagccaagtgggtgctcagaaacagagcaaaactcaaaggccaggat 359

            
Query: 241 t 241
           |
Sbjct: 360 t 360


>gnl|LJGI|DC599909 similar to UniRef100_Q29M22 Cluster: GA13357-PA; n=1; Drosophila
           pseudoobscura|Rep: GA13357-PA - Drosophila pseudoobscura
           (Fruit fly), partial (3%)
          Length = 183

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 105 tggtggcggcggcagtggtggtggtggtga 134
           ||||||||||||| ||||||||||||||||
Sbjct: 146 tggtggcggcggcggtggtggtggtggtga 117