Miyakogusa Predicted Gene
- Lj4g3v2310320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2310320.1 Non Chatacterized Hit- tr|C5YFR4|C5YFR4_SORBI
Putative uncharacterized protein Sb06g015250
OS=Sorghu,44.44,7e-17,seg,NULL,CUFF.50745.1
(1363 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74571 similar to UniRef100_A7Q8D5 Cluster: Chromosome... 771 0.0
gnl|LJGI|TC69169 homologue to UniRef100_A7Q8D5 Cluster: Chromoso... 507 e-143
gnl|LJGI|TC80124 similar to UniRef100_A7Q8D5 Cluster: Chromosome... 60 4e-08
gnl|LJGI|FS338840 similar to UniRef100_A7Q8D5 Cluster: Chromosom... 56 6e-07
>gnl|LJGI|TC74571 similar to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 923
Score = 771 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Plus
Query: 971 ggagggtggagtcacaacgtgaaggtaaaaccaaaacaggggaaaaccaccaccacaacc 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagggtggagtcacaacgtgaaggtaaaaccaaaacaggggaaaaccaccaccacaacc 60
Query: 1031 accgttgcatgaaggagagggttcgatgtggagggctattcagtgggttcatgatgactt 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accgttgcatgaaggagagggttcgatgtggagggctattcagtgggttcatgatgactt 120
Query: 1091 cgtcttcatcatcttcatcttcttcctcttactgggtttcttcctctgctgatgatgctg 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtcttcatcatcttcatcttcttcctcttactgggtttcttcctctgctgatgatgctg 180
Query: 1151 ctgctatgaatagtgggaaatcaacggctgtagcactctctcatggaggcagaggaagga 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgctatgaatagtgggaaatcaacggctgtagcactctctcatggaggcagaggaagga 240
Query: 1211 gctggggttgggcatttgctagtccaatgagagcttttagcagcaaaaactcttctaaag 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctggggttgggcatttgctagtccaatgagagcttttagcagcaaaaactcttctaaag 300
Query: 1271 acaataagagagacattattagagatgcaaatgataagaatgctactccaaatttatctg 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaataagagagacattattagagatgcaaatgataagaatgctactccaaatttatctg 360
Query: 1331 ctataccatctttgcttgctgcaagaagctaga 1363
|||||||||||||||||| ||||||||||||||
Sbjct: 361 ctataccatctttgcttgttgcaagaagctaga 393
>gnl|LJGI|TC69169 homologue to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 568
Score = 507 bits (256), Expect = e-143
Identities = 294/313 (93%)
Strand = Plus / Minus
Query: 217 agatccaatgttgtatcctctgtttccatcactgctgcagcagcaacctctgcagcacca 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agatccaatgttgtatcctctgtttccatcactgctgcagcagcaacctctgcagcacca 254
Query: 277 cctgttttttcttcctcttcttcttctcttgccctcactgatgtcagtgatagccgtcac 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cctgttttttcttcctcttcttcttctcttgccctcactgatgtcagtgatagccgtcac 194
Query: 337 aatcgccatgactatcactcacggaggactcgccttccttttctcttagccnnnnnnnnn 396
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aatcgccatgactatcactcacggaggactcgccttccttttctcttagccaagaagaag 134
Query: 397 nnnnnnnnnngttcctctgtttcaggttcctctgtttctggctcctctgttttaggtgcc 456
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aagaagaaaggttcctctgtttcaggttcctctgtttctggctcctctgttttaggtgcc 74
Query: 457 tctgtttcaggcgcaacctctgcttctgacaagatcattctcaagcgcagcaaatccacc 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tctgtttcaggcgcaacctctgcttctgacaagatcattctcaagcgcagcaaatccacc 14
Query: 517 gccacacctagaa 529
|||||||||||||
Sbjct: 13 gccacacctagaa 1
Score = 307 bits (155), Expect = 1e-82
Identities = 155/155 (100%)
Strand = Plus / Minus
Query: 1 atgatccacatggaaggaatcaaaggaggaggaggaggaagagttgaggatcatgacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atgatccacatggaaggaatcaaaggaggaggaggaggaagagttgaggatcatgacatg 470
Query: 61 ggtgatggcatgcaatgcattgaccatcctttcagaaacaacaacccaggtgggatctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ggtgatggcatgcaatgcattgaccatcctttcagaaacaacaacccaggtgggatctgt 410
Query: 121 gctctttgccttcaagagaagcttggcaagcttgt 155
|||||||||||||||||||||||||||||||||||
Sbjct: 409 gctctttgccttcaagagaagcttggcaagcttgt 375
>gnl|LJGI|TC80124 similar to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 524
Score = 60.0 bits (30), Expect = 4e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1227 tgctagtccaatgagagcttttagcagcaaaaactcttctaaagacaataagag 1280
||||||||| ||||||||||||||| || |||||||||| || ||||| |||||
Sbjct: 1 tgctagtcccatgagagcttttagccgccaaaactcttccaaggacaacaagag 54
>gnl|LJGI|FS338840 similar to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 749
Score = 56.0 bits (28), Expect = 6e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 100 aacaacccaggtgggatctgtgctctttgccttcaagagaagcttggcaagcttgt 155
|||| ||| ||||||||||||||| ||||||| ||||| |||||||| || |||||
Sbjct: 400 aacagccctggtgggatctgtgctttttgcctccaagaaaagcttggtaaacttgt 455
Score = 52.0 bits (26), Expect = 9e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 4 atccacatggaaggaatcaaaggagg 29
||||||||||||||||||||||||||
Sbjct: 301 atccacatggaaggaatcaaaggagg 326