Miyakogusa Predicted Gene
- Lj4g3v2298180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2298180.1 Non Chatacterized Hit- tr|I1L272|I1L272_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41329
PE,86.75,0,CDC50,Protein of unknown function DUF284, transmembrane
eukaryotic; seg,NULL; SUBFAMILY NOT NAMED,NU,CUFF.50825.1
(1089 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59632 weakly similar to UniRef100_Q10CF0 Cluster: LEM... 959 0.0
gnl|LJGI|TC78967 similar to UniRef100_A7Q173 Cluster: Chromosome... 821 0.0
gnl|LJGI|TC73959 weakly similar to UniRef100_Q10CF0 Cluster: LEM... 381 e-105
gnl|LJGI|AV770920 similar to UniRef100_A7Q173 Cluster: Chromosom... 178 5e-44
gnl|LJGI|TC82491 similar to UniRef100_A7Q173 Cluster: Chromosome... 109 4e-23
gnl|LJGI|TC57152 cytochrome P450 [Lotus corniculatus var. japoni... 72 8e-12
gnl|LJGI|AV409341 similar to UniRef100_A7PTQ1 Cluster: Chromosom... 70 3e-11
gnl|LJGI|TC76118 similar to UniRef100_A7QMK1 Cluster: Chromosome... 60 3e-08
gnl|LJGI|TC60748 similar to UniRef100_A7QMK1 Cluster: Chromosome... 60 3e-08
>gnl|LJGI|TC59632 weakly similar to UniRef100_Q10CF0 Cluster: LEM3 family/CDC50
family protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: LEM3 family/CDC50 family protein, expressed -
Oryza sativa subsp. japonica (Rice), partial (35%)
Length = 865
Score = 959 bits (484), Expect = 0.0
Identities = 484/484 (100%)
Strand = Plus / Plus
Query: 1 atgttgactgacacctctggagctcgggaaattgtgataatggatctcgatgaagaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atgttgactgacacctctggagctcgggaaattgtgataatggatctcgatgaagaaagt 441
Query: 61 tcgacaacatcggttagcaggagagtgccggcaattccaggtcggccggcacaaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcgacaacatcggttagcaggagagtgccggcaattccaggtcggccggcacaaaaggga 501
Query: 121 gctttctatcagtttacacagcagaaccttccagcatgtaaacctgtccttacacctaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gctttctatcagtttacacagcagaaccttccagcatgtaaacctgtccttacacctaga 561
Query: 181 gcagtcattgctacgtttctattgatgggtttcattttcattcctgttggacttgttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcagtcattgctacgtttctattgatgggtttcattttcattcctgttggacttgttaca 621
Query: 241 cttcgtgcttcgtatagtgttgttgaaattgaggacaggtatgacattgattgtgtaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cttcgtgcttcgtatagtgttgttgaaattgaggacaggtatgacattgattgtgtaccg 681
Query: 301 gatcaatttaaaagtaataaggtcgcatatatcaaagatgactcaatctccaaaaactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gatcaatttaaaagtaataaggtcgcatatatcaaagatgactcaatctccaaaaactgt 741
Query: 361 tcacgattcttaaaggtacctaagccaatgagagcaccgatttatatctattatcagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tcacgattcttaaaggtacctaagccaatgagagcaccgatttatatctattatcagctt 801
Query: 421 gataactattaccagaaccaccgacggtatgtaaaaagtagaagtgatcagcaactctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gataactattaccagaaccaccgacggtatgtaaaaagtagaagtgatcagcaactctta 861
Query: 481 catg 484
||||
Sbjct: 862 catg 865
>gnl|LJGI|TC78967 similar to UniRef100_A7Q173 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 882
Score = 821 bits (414), Expect = 0.0
Identities = 417/418 (99%)
Strand = Plus / Plus
Query: 672 aaagcatgtttacccgtttaattttcagaatgggacattgattgggggtggaaagttgga 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagcatgtttacccgtttaattttcagaatgggacattgattgggggtggaaagttgga 60
Query: 732 tcaaagtgttcctctaagtgatcaagaagatctgatagtttggatgcgtactgctgctct 791
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 tcaaagtgttcctctaagtgatcaagaagatctgatagtttggatgcgtactggtgctct 120
Query: 792 ccccagcttccgaaagttgtatggaagaattgaagaggatttggatgcagatgatgttat 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccccagcttccgaaagttgtatggaagaattgaagaggatttggatgcagatgatgttat 180
Query: 852 agtcgtccacctagagaacaattataacacttacagttttggtggaaagaagaagcttgt 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtcgtccacctagagaacaattataacacttacagttttggtggaaagaagaagcttgt 240
Query: 912 tctgtcgacaacaagctggctgggaggaaaaaatgacttccttggagttgccaatttact 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctgtcgacaacaagctggctgggaggaaaaaatgacttccttggagttgccaatttact 300
Query: 972 tgttggaagcttttgtatattgatctcgatcatcttcctgttgcttcatgtgaaaaatcc 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgttggaagcttttgtatattgatctcgatcatcttcctgttgcttcatgtgaaaaatcc 360
Query: 1032 tagaccttatggggacacaacctactcatcttggaataagaaaaacactgctacctga 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagaccttatggggacacaacctactcatcttggaataagaaaaacactgctacctga 418
>gnl|LJGI|TC73959 weakly similar to UniRef100_Q10CF0 Cluster: LEM3 family/CDC50
family protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: LEM3 family/CDC50 family protein, expressed -
Oryza sativa subsp. japonica (Rice), partial (8%)
Length = 501
Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Plus
Query: 1 atgttgactgacacctctggagctcgggaaattgtgataatggatctcgatgaagaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atgttgactgacacctctggagctcgggaaattgtgataatggatctcgatgaagaaagt 369
Query: 61 tcgacaacatcggttagcaggagagtgccggcaattccaggtcggccggcacaaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcgacaacatcggttagcaggagagtgccggcaattccaggtcggccggcacaaaaggga 429
Query: 121 gctttctatcagtttacacagcagaaccttccagcatgtaaacctgtccttacacctaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gctttctatcagtttacacagcagaaccttccagcatgtaaacctgtccttacacctaga 489
Query: 181 gcagtcattgct 192
||||||||||||
Sbjct: 490 gcagtcattgct 501
>gnl|LJGI|AV770920 similar to UniRef100_A7Q173 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 426
Score = 178 bits (90), Expect = 5e-44
Identities = 103/106 (97%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 925 agctggctgggaggaaaaaatgacttccttggagttgccaatttac-ttgttggaagctt 983
|||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 426 agctggctgggagggaaaaatgacttccttggagttgccaatctaccttgttggaagctt 367
Query: 984 ttgtatattgatctcgatcatcttcctgttgcttcatgtgaaaaat 1029
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttgtatattgatctcgatcatcttcctgttgcttcatgtgaaaaat 321
>gnl|LJGI|TC82491 similar to UniRef100_A7Q173 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 310
Score = 109 bits (55), Expect = 4e-23
Identities = 85/94 (90%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 816 aagaattgaagaggatttggatgcagatgatgttatagtcgtccacctagagaacaatta 875
|||||||||||||||||| |||| ||||||||||| || ||||||| ||| |||||||
Sbjct: 207 aagaattgaagaggattttgatggagatgatgtta--gtggtccacccagaaaacaattt 264
Query: 876 taacacttacagttttggtggaaagaagaagctt 909
||||||||| ||||||||||||||||||||||||
Sbjct: 265 taacacttatagttttggtggaaagaagaagctt 298
>gnl|LJGI|TC57152 cytochrome P450 [Lotus corniculatus var. japonicus]
Length = 1458
Score = 71.9 bits (36), Expect = 8e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 395 caccgatttatatctattatcagcttgataactattaccagaaccaccgacggtatgtaa 454
||||||||||| |||| || |||||||| |||| ||||||||| || || |||||||| |
Sbjct: 520 caccgatttatgtctactaccagcttgacaacttttaccagaatcatcgccggtatgtta 579
Query: 455 aaagtagaagtgatcagcaa 474
|||| ||||||||||||||
Sbjct: 580 aaagccgaagtgatcagcaa 599
>gnl|LJGI|AV409341 similar to UniRef100_A7PTQ1 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 321
Score = 69.9 bits (35), Expect = 3e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 401 tttatatctattatcagcttgataactattaccagaaccaccgacggtatgtaaaaagta 460
||||| |||||||||||||||| |||| |||||||||||| || || || || |||||||
Sbjct: 189 tttatgtctattatcagcttgacaacttttaccagaaccatcgccgatacgttaaaagta 248
Query: 461 gaagtga 467
|||||||
Sbjct: 249 gaagtga 255
>gnl|LJGI|TC76118 similar to UniRef100_A7QMK1 Cluster: Chromosome chr19 scaffold_126,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 726
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 541 ccaattgtaccttgtgggttgatagcatggagtatgttcaatgatacata 590
|||||| ||||||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 665 ccaattttaccttgtgggcttatagcttggagcatgttcaatgatacata 714
>gnl|LJGI|TC60748 similar to UniRef100_A7QMK1 Cluster: Chromosome chr19 scaffold_126,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1480
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 541 ccaattgtaccttgtgggttgatagcatggagtatgttcaatgatacata 590
|||||| ||||||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 629 ccaattttaccttgtgggcttatagcttggagcatgttcaatgatacata 678