Miyakogusa Predicted Gene
- Lj4g3v2296130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2296130.1 Non Chatacterized Hit- tr|I1P1Y6|I1P1Y6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,25.41,0.000000000006,mTERF,Mitochodrial transcription termination
factor-related; seg,NULL; Mitochondrial termination
fac,NODE_40986_length_2753_cov_111.773705.path1.1
(909 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76152 similar to UniRef100_A7Q179 Cluster: Chromosome... 908 0.0
gnl|LJGI|TC73630 similar to UniRef100_A7Q179 Cluster: Chromosome... 648 0.0
gnl|LJGI|AV774579 similar to UniRef100_A7Q179 Cluster: Chromosom... 88 1e-16
>gnl|LJGI|TC76152 similar to UniRef100_A7Q179 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 469
Score = 908 bits (458), Expect = 0.0
Identities = 458/458 (100%)
Strand = Plus / Plus
Query: 1 atgtccccagctgcaggagctgtagcattgcactcttccctgtgcacaatctctcctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atgtccccagctgcaggagctgtagcattgcactcttccctgtgcacaatctctcctgat 71
Query: 61 aaaccatcacctccttccacctcaaccaccctgctgattaccaaacccaaaagcctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aaaccatcacctccttccacctcaaccaccctgctgattaccaaacccaaaagcctcctt 131
Query: 121 caaaaccatccactttacacaccaacaacccatgcaaaactctcccttcagttcaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 caaaaccatccactttacacaccaacaacccatgcaaaactctcccttcagttcaaagag 191
Query: 181 aaaatcctctgccttgaggtaatgggtgttgatgcagggagagcactgtctcaaaaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaaatcctctgccttgaggtaatgggtgttgatgcagggagagcactgtctcaaaaccct 251
Query: 241 gacctccggacagccaccatggaatccattcaatccatcatcagcttccttctctccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gacctccggacagccaccatggaatccattcaatccatcatcagcttccttctctccaaa 311
Query: 301 ggcatccagcacaaggacttgccaagaatctttggcatgtgccccaagattctcacctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggcatccagcacaaggacttgccaagaatctttggcatgtgccccaagattctcacctct 371
Query: 361 gacatcaaaactgaactcaaccctgtttttgattttctcctgcatgacctcaaagtccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gacatcaaaactgaactcaaccctgtttttgattttctcctgcatgacctcaaagtccca 431
Query: 421 gattacaatttcaggaaggttatcaataaatgtccaag 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gattacaatttcaggaaggttatcaataaatgtccaag 469
>gnl|LJGI|TC73630 similar to UniRef100_A7Q179 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 607
Score = 648 bits (327), Expect = 0.0
Identities = 345/351 (98%)
Strand = Plus / Plus
Query: 559 gttctgttggtgtctaatgtagaaaggaccctgatccccaagttggagtatttggagaac 618
|||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 1 gttctgttggtgtctaatgtagaaaggaccgtgatccccaacctggagtatgtggagaac 60
Query: 619 ttggggttttctaagggggaggctagaagtttggtgttgaggtgtccagcattgttcact 678
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 61 ttggggttttctaagggggaggctagaagtttggttttgaggtgtccagccttgttcact 120
Query: 679 ttcagcatagaaaataattttgagcctaagtttgagtactttgctggggaaatggggagg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagcatagaaaataattttgagcctaagtttgagtactttgctggggaaatggggagg 180
Query: 739 aaattggaggagctgaaggaatttcctcagtactttgcttttagtttggagaacaggata 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaattggaggagctgaaggaatttcctcagtactttgcttttagtttggagaacaggata 240
Query: 799 aagcctaggcacatggaggttgtgcaatgtgggatcaatttacctttgtcagtgatgctt 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcctaggcacatggaggttgtgcaatgtgggatcaatttacctttgtcagtgatgctt 300
Query: 859 aaaagcactgatgaagaatttagggagctgataaagcagggggatggatga 909
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaagcactgatgaagaatttagggagctgataaagcagggggatggatga 351
>gnl|LJGI|AV774579 similar to UniRef100_A7Q179 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 425
Score = 87.7 bits (44), Expect = 1e-16
Identities = 117/136 (86%), Gaps = 4/136 (2%)
Strand = Plus / Minus
Query: 755 aggaatttcctcagtactttgcttttagtttggagaacaggataaagcctaggcacatgg 814
|||||||||||| |||| |||||||||||||||| | | || |||||||||||| ||
Sbjct: 425 aggaatttcctccgtaccctgcttttagtttggagtcccg-atcaagcctaggcacc-gg 368
Query: 815 aggttgtgcaatgtgggatcaatttacctttgtcagtgat-gcttaaaagcactgatgaa 873
|| ||| || |||||||||| | ||||||||| | |||| |||||||||||||||||||
Sbjct: 367 agcttgggccatgtgggatccagttacctttgccc-tgatcgcttaaaagcactgatgaa 309
Query: 874 gaatttagggagctga 889
||||||||||||||||
Sbjct: 308 gaatttagggagctga 293