Miyakogusa Predicted Gene

Lj4g3v2295560.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2295560.1 Non Chatacterized Hit- tr|I1L235|I1L235_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52830
PE,62.14,0.0000000000006,seg,NULL,
gene.Ljchr4_pseudomol_20120830.path1.gene6359.1
         (333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62003 similar to UniRef100_Q5TCX8-3 Cluster: Isoform ...   617   e-176
gnl|LJGI|TC58328 homologue to UniRef100_A5Y733 Cluster: Expresse...    70   9e-12

>gnl|LJGI|TC62003 similar to UniRef100_Q5TCX8-3 Cluster: Isoform 3 of Q5TCX8 ; n=1;
           Homo sapiens|Rep: Isoform 3 of Q5TCX8  - Homo sapiens
           (Human), partial (4%)
          Length = 1672

 Score =  617 bits (311), Expect = e-176
 Identities = 317/319 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccatcaggtgctaagaagaggaaagctgccaagaaaaagaaggaaaagggaaccaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgccatcaggtgctaagaagaggaaagctgccaagaaaaagaaggaaaagggaaccaat 444

                                                                       
Query: 61  accaccccatcaaccaacaaccctcaaggagataatgaggtgaagtcacaatctcaagat 120
           ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 445 accaccccatcaaccaacaaccctcaaggagataatgagttgaagtcccaatctcaagat 504

                                                                       
Query: 121 gagagaggaagtgatggcggcgagggtggttcgcccgcgtatcgcgatagtgagcatgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagagaggaagtgatggcggcgagggtggttcgcccgcgtatcgcgatagtgagcatgca 564

                                                                       
Query: 181 ttcggtggaaggaatgaagatgtggtggaaagtgatccaccagctgctcagccttctgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcggtggaaggaatgaagatgtggtggaaagtgatccaccagctgctcagccttctgct 624

                                                                       
Query: 241 gctgttgccaatgacattaagattgatgatgaagaaagaggtggtaaggatttgatagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctgttgccaatgacattaagattgatgatgaagaaagaggtggtaaggatttgatagct 684

                              
Query: 301 gagaagagtgatgagggca 319
           |||||||||||||||||||
Sbjct: 685 gagaagagtgatgagggca 703


>gnl|LJGI|TC58328 homologue to UniRef100_A5Y733 Cluster: Expressed protein; n=1;
           Cucumis melo|Rep: Expressed protein - Cucumis melo
           (Muskmelon), partial (5%)
          Length = 775

 Score = 69.9 bits (35), Expect = 9e-12
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 1   atgccatcaggtgctaagaagaggaaagctgccaagaaaaagaagga 47
           ||||| ||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 186 atgccttcaggtgctaagaagagaaaagctgccaggaaaaagaagga 232