Miyakogusa Predicted Gene

Lj4g3v2295500.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2295500.1 Non Chatacterized Hit- tr|C5XWB9|C5XWB9_SORBI
Putative uncharacterized protein Sb04g024210
OS=Sorghu,37.5,2e-19,seg,NULL,
NODE_57364_length_565_cov_90.143364.path1.1
         (456 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69447 weakly similar to UniRef100_A7Q2W7 Cluster: Chr...   886   0.0  

>gnl|LJGI|TC69447 weakly similar to UniRef100_A7Q2W7 Cluster: Chromosome chr12
           scaffold_47, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (16%)
          Length = 1226

 Score =  886 bits (447), Expect = 0.0
 Identities = 447/447 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaggtagctcccaccgtagtgtttctgttcagagacacacaaggcggcttcgtctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgaaggtagctcccaccgtagtgtttctgttcagagacacacaaggcggcttcgtctct 190

                                                                       
Query: 61  gccatctctgaagctctccaccctaacccttcttcctccttcacccgccttgaggactcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gccatctctgaagctctccaccctaacccttcttcctccttcacccgccttgaggactcc 250

                                                                       
Query: 121 tttgagctctccttggagggttatggaatcaaggacctcaaagcttctgggaacgttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tttgagctctccttggagggttatggaatcaaggacctcaaagcttctgggaacgttatt 310

                                                                       
Query: 181 caccatgttgataatcatggcatttaccaggtgtcggttgtggttatgcagcattatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caccatgttgataatcatggcatttaccaggtgtcggttgtggttatgcagcattatgaa 370

                                                                       
Query: 241 ccaccggtactagcatgtgctcttaatgaggtccttaatgaaattgctggtgataagtca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccaccggtactagcatgtgctcttaatgaggtccttaatgaaattgctggtgataagtca 430

                                                                       
Query: 301 tcctcggtgccttcacttttggtaccatttttggtggaatcatccaaggttaaagggcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcctcggtgccttcacttttggtaccatttttggtggaatcatccaaggttaaagggcaa 490

                                                                       
Query: 361 agtaaatccctaagatcagatgaaggaaaacctttaattttggggatacaggttggtcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agtaaatccctaagatcagatgaaggaaaacctttaattttggggatacaggttggtcaa 550

                                      
Query: 421 agtacagacgtaatgcaggctttactc 447
           |||||||||||||||||||||||||||
Sbjct: 551 agtacagacgtaatgcaggctttactc 577