Miyakogusa Predicted Gene

Lj4g3v2291340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2291340.1 Non Chatacterized Hit- tr|B7FLX3|B7FLX3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,67.74,3e-17,Pectinesterase,Pectinesterase, catalytic;
PMEI,Pectinesterase inhibitor; no
description,Pectinestera,gene.g56614.t1.1
         (1764 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80528 similar to UniRef100_Q9SC89 Cluster: Pectin met...   327   1e-88

>gnl|LJGI|TC80528 similar to UniRef100_Q9SC89 Cluster: Pectin methyl-esterase PEF1
           precursor; n=1; Medicago truncatula|Rep: Pectin
           methyl-esterase PEF1 precursor - Medicago truncatula
           (Barrel medic), partial (4%)
          Length = 301

 Score =  327 bits (165), Expect = 1e-88
 Identities = 175/177 (98%), Gaps = 1/177 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaccactgcatttaacagcaaccaggagaggaagaagaagtatgccattctcggcgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgaccactgcatttaacagcaaccaggagaggaagaagaagtatgccattctcggcgtc 176

                                                                       
Query: 61  tcttctatcttgcttgtggccatggtagcttgcgtggccgtcggcataaacagcggcgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tcttctatcttgcttgtggccatggtagcttgcgtggccgtcggcataaacagcggcgcc 236

                                                                    
Query: 121 gaagttggcagcgaaggatcaagtgacaa-ccatgttacaaaatctcaaaagaacgt 176
           ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 237 gaagttggcagcgaaggatcaagtgacaacccatgtcacaaaatctcaaaagaacgt 293