Miyakogusa Predicted Gene
- Lj4g3v2289240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2289240.1 Non Chatacterized Hit- tr|I1MRL9|I1MRL9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58056
PE,87.96,0,UNCHARACTERIZED,NULL; Pumilio-like repeats,Pumilio
RNA-binding repeat; no description,Armadillo-like,CUFF.50701.1
(1650 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62107 similar to UniRef100_A7Q8H8 Cluster: Chromosome... 977 0.0
gnl|LJGI|TC59884 similar to UniRef100_A7Q8H8 Cluster: Chromosome... 856 0.0
gnl|LJGI|FS345878 similar to UniRef100_A7Q8H8 Cluster: Chromosom... 724 0.0
gnl|LJGI|TC68501 similar to UniRef100_A7Q8H8 Cluster: Chromosome... 718 0.0
>gnl|LJGI|TC62107 similar to UniRef100_A7Q8H8 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 877
Score = 977 bits (493), Expect = 0.0
Identities = 507/514 (98%)
Strand = Plus / Plus
Query: 1137 aaaagacccattagttagaaggcaagagcttttgatcaatagtggacttgcagagagtct 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagacccattagttagaaggcaagagcttttgatcaatagtggacttgcagagagtct 60
Query: 1197 tcttgatgtatgtactgagagtgtgggagaactgatacggtcaaattttggcaaagaggt 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttgatgtatgtactgagagtgtgggagaactgatacggtcaaattttggcaaagaggt 120
Query: 1257 cttatatgaggttgcaacagggggttccggtggcatactacacccaactttggacgataa 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttatatgaggttgcaacagggggttccggtggcatactacacccaactttggacgataa 180
Query: 1317 gattaattctcttcacaaagcaatagcatctcttgcagcattgccaaaatcagaagattc 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gattaattctcttcacaaagcaatagcatctcttgcagcattgccaaaatcagaagattc 240
Query: 1377 agaagaggagcatgtccttgaaaatttccattcaaatcggaccattagaaaactaatttt 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaagaggagcatgtccttgaaaatttccattcaaatcggaccattagaaaactaatttt 300
Query: 1437 ggattgccccagctttgcttccacattatgggaggaagctttaaaagggaaatgtgagtc 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggattgccccagctttgcttccacattatgggaggaagctttaaaagggaaatgtgagtc 360
Query: 1497 atgggcgcatggtcacagctgtaaggttatttctgcatttttggaatcaccagattctga 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgggcgcatggtcacagctgtaaggttatttctgcatttttggaatcaccagattctga 420
Query: 1557 ggtacagaaacttgcnnnnnnngagctgcagccattaattgataatggaattctgaagaa 1616
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtacagaaacttgcaaaaaaagagctgcagccattaattgataatggaattctgaagaa 480
Query: 1617 cctgaaacccacggaacaagcaacccaataattt 1650
||||||||||||||||||||||||||||||||||
Sbjct: 481 cctgaaacccacggaacaagcaacccaataattt 514
>gnl|LJGI|TC59884 similar to UniRef100_A7Q8H8 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 758
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 atgagacgtcacgagattgctaaagaggatagagctaagttggtgacagaagctttgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atgagacgtcacgagattgctaaagaggatagagctaagttggtgacagaagctttgcaa 386
Query: 61 aagatgaaggggaagattcctgagattgcggggtctcatgtttcttcccgtgtccttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagatgaaggggaagattcctgagattgcggggtctcatgtttcttcccgtgtccttcag 446
Query: 121 acatgtgtcaagcattgttcacaagctgaaagagatgcggtgtttgaggagcttcagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 acatgtgtcaagcattgttcacaagctgaaagagatgcggtgtttgaggagcttcagcca 506
Query: 181 cattttctgaatctagcatataatgcatattctgttcacttagtaaagaagatgcttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cattttctgaatctagcatataatgcatattctgttcacttagtaaagaagatgcttgac 566
Query: 241 aatgcctccaagaagcaactagctggctttatctccagtcttcgtggtcatgttgctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aatgcctccaagaagcaactagctggctttatctccagtcttcgtggtcatgttgctcct 626
Query: 301 cttcttcgccacatggttggatcagttgttgtggagcatgcttacgagctggcaaatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cttcttcgccacatggttggatcagttgttgtggagcatgcttacgagctggcaaatgct 686
Query: 361 gcacaaaaacaacagctgctttcggaattgtactccactgagcttcagctgtttaaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gcacaaaaacaacagctgctttcggaattgtactccactgagcttcagctgtttaaggac 746
Query: 421 ctagtctcatcg 432
||||||||||||
Sbjct: 747 ctagtctcatcg 758
>gnl|LJGI|FS345878 similar to UniRef100_A7Q8H8 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 679
Score = 724 bits (365), Expect = 0.0
Identities = 379/386 (98%)
Strand = Plus / Minus
Query: 1265 aggttgcaacagggggttccggtggcatactacacccaactttggacgataagattaatt 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aggttgcaacagggggttccggtggcatactacacccaactttggacgataagattaatt 523
Query: 1325 ctcttcacaaagcaatagcatctcttgcagcattgccaaaatcagaagattcagaagagg 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ctcttcacaaagcaatagcatctcttgcagcattgccaaaatcagaagattcagaagagg 463
Query: 1385 agcatgtccttgaaaatttccattcaaatcggaccattagaaaactaattttggattgcc 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agcatgtccttgaaaatttccattcaaatcggaccattagaaaactaattttggattgcc 403
Query: 1445 ccagctttgcttccacattatgggaggaagctttaaaagggaaatgtgagtcatgggcgc 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ccagctttgcttccacattatgggaggaagctttaaaagggaaatgtgagtcatgggcgc 343
Query: 1505 atggtcacagctgtaaggttatttctgcatttttggaatcaccagattctgaggtacaga 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atggtcacagctgtaaggttatttctgcatttttggaatcaccagattctgaggtacaga 283
Query: 1565 aacttgcnnnnnnngagctgcagccattaattgataatggaattctgaagaacctgaaac 1624
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aacttgcaaaaaaagagctgcagccattaattgataatggaattctgaagaacctgaaac 223
Query: 1625 ccacggaacaagcaacccaataattt 1650
||||||||||||||||||||||||||
Sbjct: 222 ccacggaacaagcaacccaataattt 197
>gnl|LJGI|TC68501 similar to UniRef100_A7Q8H8 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 738
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 1 atgagacgtcacgagattgctaaagaggatagagctaagttggtgacagaagctttgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgagacgtcacgagattgctaaagaggatagagctaagttggtgacagaagctttgcaa 436
Query: 61 aagatgaaggggaagattcctgagattgcggggtctcatgtttcttcccgtgtccttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aagatgaaggggaagattcctgagattgcggggtctcatgtttcttcccgtgtccttcag 496
Query: 121 acatgtgtcaagcattgttcacaagctgaaagagatgcggtgtttgaggagcttcagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acatgtgtcaagcattgttcacaagctgaaagagatgcggtgtttgaggagcttcagcca 556
Query: 181 cattttctgaatctagcatataatgcatattctgttcacttagtaaagaagatgcttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cattttctgaatctagcatataatgcatattctgttcacttagtaaagaagatgcttgac 616
Query: 241 aatgcctccaagaagcaactagctggctttatctccagtcttcgtggtcatgttgctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aatgcctccaagaagcaactagctggctttatctccagtcttcgtggtcatgttgctcct 676
Query: 301 cttcttcgccacatggttggatcagttgttgtggagcatgcttacgagctggcaaatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cttcttcgccacatggttggatcagttgttgtggagcatgcttacgagctggcaaatgct 736
Query: 361 gc 362
||
Sbjct: 737 gc 738