Miyakogusa Predicted Gene

Lj4g3v2289100.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2289100.1 Non Chatacterized Hit- tr|H3AWU6|H3AWU6_LATCH
Uncharacterized protein OS=Latimeria chalumnae
GN=WDR4,22.86,3e-18,Quinoprotein alcohol
dehydrogenase-like,Quinonprotein alcohol dehydrogenase-like; WD40,WD40
repeat; ,CUFF.50860.1
         (1851 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58163 similar to UniRef100_A7Q8I3 Cluster: Chromosome...  1516   0.0  
gnl|LJGI|TC62781 weakly similar to UniRef100_A7Q8I3 Cluster: Chr...  1239   0.0  

>gnl|LJGI|TC58163 similar to UniRef100_A7Q8I3 Cluster: Chromosome chr5 scaffold_64,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_64, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 809

 Score = 1516 bits (765), Expect = 0.0
 Identities = 765/765 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcaacaccagacatcagagggattctcaccgccttcaatccttctctcgacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  atggcttcaacaccagacatcagagggattctcaccgccttcaatccttctctcgacttg 104

                                                                       
Query: 61  ttcgccgtcaccgccggcgacggccgcatcaagatatgggatactctgaagggtcagctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ttcgccgtcaccgccggcgacggccgcatcaagatatgggatactctgaagggtcagctc 164

                                                                       
Query: 121 cagaacgagtttgcagatatcacttcaactcatgcagctactatcgccttaaagggccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cagaacgagtttgcagatatcacttcaactcatgcagctactatcgccttaaagggccat 224

                                                                       
Query: 181 ctttctgttgattacacttgcatccactggttttcttttgaaagaaagaggaaaaggaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ctttctgttgattacacttgcatccactggttttcttttgaaagaaagaggaaaaggaag 284

                                                                       
Query: 241 catacttcctcattgttggtgcttggaacgggtagcggtgatgttttagcactcgatgta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 catacttcctcattgttggtgcttggaacgggtagcggtgatgttttagcactcgatgta 344

                                                                       
Query: 301 gctgctggtcaattggcttggagaattgctgactgtcatcctggaggtgtgagagccatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gctgctggtcaattggcttggagaattgctgactgtcatcctggaggtgtgagagccatt 404

                                                                       
Query: 361 tcatcttcggcaaatggatcgagcatttatactgctggtgcagatggaatggtgtgcgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tcatcttcggcaaatggatcgagcatttatactgctggtgcagatggaatggtgtgcgtg 464

                                                                       
Query: 421 atcgattttatgtctggaaatctgttggagaaatttaaagcatccacgaaggcagtatct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atcgattttatgtctggaaatctgttggagaaatttaaagcatccacgaaggcagtatct 524

                                                                       
Query: 481 tgcatgtctgtttcttcggatgggaagacgttagctactgcttcagcacagttgaagatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgcatgtctgtttcttcggatgggaagacgttagctactgcttcagcacagttgaagatt 584

                                                                       
Query: 541 tttaactgttctaatcacaaaaagattcaaaagctatctggtcatcctggacctgtcagg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttaactgttctaatcacaaaaagattcaaaagctatctggtcatcctggacctgtcagg 644

                                                                       
Query: 601 tgtatggtcttcactgaagatgacaagtatatcctctcatctgctgttggtgaaagatat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgtatggtcttcactgaagatgacaagtatatcctctcatctgctgttggtgaaagatat 704

                                                                       
Query: 661 gttgctgtttggagggtagatggtgctaaaaagcagtcagctagttgtgttcttgcaatg 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gttgctgtttggagggtagatggtgctaaaaagcagtcagctagttgtgttcttgcaatg 764

                                                        
Query: 721 gagcaccctgctgtctttcttgatagcaggtgcattgatagaggg 765
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gagcaccctgctgtctttcttgatagcaggtgcattgatagaggg 809


>gnl|LJGI|TC62781 weakly similar to UniRef100_A7Q8I3 Cluster: Chromosome chr5
            scaffold_64, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr5 scaffold_64, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (16%)
          Length = 946

 Score = 1239 bits (625), Expect = 0.0
 Identities = 639/646 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1206 gaaagaggaagaatttcaagannnnnnngagaaggatgtaatacatgattcgcttagaag 1265
            |||||||||||||||||||||       ||||||||||||||||||||||||||||||||
Sbjct: 1    gaaagaggaagaatttcaagatttttttgagaaggatgtaatacatgattcgcttagaag 60

                                                                        
Query: 1266 cagtaaagctgacttccttgagatagaagatgatatggttcaagatgagattgatgtaac 1325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   cagtaaagctgacttccttgagatagaagatgatatggttcaagatgagattgatgtaac 120

                                                                        
Query: 1326 ttgcatggaggaccggatgagatcactagggatgcttaaaagtgaaagtgattgtgcatc 1385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ttgcatggaggaccggatgagatcactagggatgcttaaaagtgaaagtgattgtgcatc 180

                                                                        
Query: 1386 aaactttgaactttgttcttcattgttgaagggtattgatctcgaagctactcttccaat 1445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaactttgaactttgttcttcattgttgaagggtattgatctcgaagctactcttccaat 240

                                                                        
Query: 1446 gaaaaagataagagcagctgttttgtctatggtgccaagtgaagtattcaaactactgga 1505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gaaaaagataagagcagctgttttgtctatggtgccaagtgaagtattcaaactactgga 300

                                                                        
Query: 1506 agtgttgctggctacatggcaatcaaggtcatctagtggaaagtatgttcttccatggat 1565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  agtgttgctggctacatggcaatcaaggtcatctagtggaaagtatgttcttccatggat 360

                                                                        
Query: 1566 atatagcatattagtaaatcatggtcacaatattattgctcaggaatctgggccacgtct 1625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  atatagcatattagtaaatcatggtcacaatattattgctcaggaatctgggccacgtct 420

                                                                        
Query: 1626 gcttgattccttacacaagattacaaattctagagggtgtgcgcttcagcctttattaca 1685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  gcttgattccttacacaagattacaaattctagagggtgtgcgcttcagcctttattaca 480

                                                                        
Query: 1686 attatcaggtcgtctgcaactggtgacatcacagattgacaaggcttctcagacaataag 1745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  attatcaggtcgtctgcaactggtgacatcacagattgacaaggcttctcagacaataag 540

                                                                        
Query: 1746 tcatttggtgcatgatccccaaacagaagaaagtggagatgaggatgaatactatcgtga 1805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tcatttggtgcatgatccccaaacagaagaaagtggagatgaggatgaatactatcgtga 600

                                                          
Query: 1806 ggaagaagaagatgcatctgaaataagtagcgatgatgaggcttga 1851
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  ggaagaagaagatgcatctgaaataagtagcgatgatgaggcttga 646