Miyakogusa Predicted Gene
- Lj4g3v2267660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2267660.1 CUFF.50667.1
(345 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71650 homologue to UniRef100_Q2HU21 Cluster: DNA-dire... 135 2e-31
gnl|LJGI|TC64618 homologue to UniRef100_Q2HU21 Cluster: DNA-dire... 135 2e-31
>gnl|LJGI|TC71650 homologue to UniRef100_Q2HU21 Cluster: DNA-directed RNA polymerase,
subunit C11/M/9; n=1; Medicago truncatula|Rep:
DNA-directed RNA polymerase, subunit C11/M/9 - Medicago
truncatula (Barrel medic), complete
Length = 685
Score = 135 bits (68), Expect = 2e-31
Identities = 269/336 (80%)
Strand = Plus / Plus
Query: 8 ccatgaaattttgccgccgatgcaacaacattctgtaccctaaagaggacacggagcaga 67
||||||||||||||||| ||||||||||||||||||||||||||| |||| || ||||
Sbjct: 119 ccatgaaattttgccgcgaatgcaacaacattctgtaccctaaagaagacagagaccaga 178
Query: 68 aggttctctactacgcttgccgccactgcaaccaccaggagattgcagatgataacattg 127
|||||||| ||||||||||||| | || | ||||||||| |||| ||| | ||
Sbjct: 179 aggttctcctctacgcttgccgcaattgtgatcaccaggaggttgctgatagctgctgtg 238
Query: 128 tctacagaaatcagatacgccaatctgttggacggaacccgcaagcagagcaaaatgttg 187
| || || ||| |||||| || ||||||||| | | | |||| ||| |||| |
Sbjct: 239 tgtataggaatgagatacatcattctgttggagagcgcacacaagtgttgcaggatgtag 298
Query: 188 ctgcagatccaactcttccccgcaccaagtctgttcgttgttctcaatgcaatcatggag 247
|||||||||||||| | || || |||||| ||||||| || ||||||| |||||||| |
Sbjct: 299 ctgcagatccaactttgcctcggaccaaggctgttcgctgcactcaatgtaatcatggtg 358
Query: 248 aagctgtctttttccagacaacaactagaggggaagaaggcaccacactcgtttttgttt 307
||||||| ||||||||| |||| | ||||| |||||||| | ||||| |||| ||||
Sbjct: 359 aagctgtgtttttccaggcaacggccagaggagaagaaggaatgacactttttttcgttt 418
Query: 308 gctgcaacccaacctgtggccaccgatggagagact 343
|||||||||||| |||||| || |||||||||||||
Sbjct: 419 gctgcaacccaaactgtggacatcgatggagagact 454
>gnl|LJGI|TC64618 homologue to UniRef100_Q2HU21 Cluster: DNA-directed RNA polymerase,
subunit C11/M/9; n=1; Medicago truncatula|Rep:
DNA-directed RNA polymerase, subunit C11/M/9 - Medicago
truncatula (Barrel medic), complete
Length = 713
Score = 135 bits (68), Expect = 2e-31
Identities = 269/336 (80%)
Strand = Plus / Plus
Query: 8 ccatgaaattttgccgccgatgcaacaacattctgtaccctaaagaggacacggagcaga 67
||||||||||||||||| ||||||||||||||||||||||||||| |||| || ||||
Sbjct: 130 ccatgaaattttgccgcgaatgcaacaacattctgtaccctaaagaagacagagaccaga 189
Query: 68 aggttctctactacgcttgccgccactgcaaccaccaggagattgcagatgataacattg 127
|||||||| ||||||||||||| | || | ||||||||| |||| ||| | ||
Sbjct: 190 aggttctcctctacgcttgccgcaattgtgatcaccaggaggttgctgatagctgctgtg 249
Query: 128 tctacagaaatcagatacgccaatctgttggacggaacccgcaagcagagcaaaatgttg 187
| || || ||| |||||| || ||||||||| | | | |||| ||| |||| |
Sbjct: 250 tgtataggaatgagatacatcattctgttggagagcgcacacaagtgttgcaggatgtag 309
Query: 188 ctgcagatccaactcttccccgcaccaagtctgttcgttgttctcaatgcaatcatggag 247
|||||||||||||| | || || |||||| ||||||| || ||||||| |||||||| |
Sbjct: 310 ctgcagatccaactttgcctcggaccaaggctgttcgctgcactcaatgtaatcatggtg 369
Query: 248 aagctgtctttttccagacaacaactagaggggaagaaggcaccacactcgtttttgttt 307
||||||| ||||||||| |||| | ||||| |||||||| | ||||| |||| ||||
Sbjct: 370 aagctgtgtttttccaggcaacggccagaggagaagaaggaatgacactttttttcgttt 429
Query: 308 gctgcaacccaacctgtggccaccgatggagagact 343
|||||||||||| |||||| || |||||||||||||
Sbjct: 430 gctgcaacccaaactgtggacatcgatggagagact 465