Miyakogusa Predicted Gene

Lj4g3v2264010.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2264010.1 tr|C1MHW5|C1MHW5_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_4627,39.82,0.000000000000001,seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.50626.1
         (1587 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65496 similar to UniRef100_A7Q8R7 Cluster: Chromosome...  1548   0.0  

>gnl|LJGI|TC65496 similar to UniRef100_A7Q8R7 Cluster: Chromosome chr5 scaffold_64,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_64, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (46%)
          Length = 1271

 Score = 1548 bits (781), Expect = 0.0
 Identities = 784/785 (99%)
 Strand = Plus / Plus

                                                                        
Query: 738  tgttgggggtgcacattcactacatcgccatgagaagctggaaattgctgtttcaaaagc 797
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgttgggggtgcacattcactacatcgccatgagaagctggaaattgctgtttcaaaagc 60

                                                                        
Query: 798  tatgcggggacattccctgcaggaaacaaaaaatgatggccgtttccatgttcatactaa 857
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tatgcggggacattccctgcaggaaacaaaaaatgatggccgtttccatgttcatactaa 120

                                                                        
Query: 858  gacatatctggatggtgctattttaaaagaagagatggaacgttctgctgatgtactttc 917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gacatatctggatggtgctattttaaaagaagagatggaacgttctgctgatgtactttc 180

                                                                        
Query: 918  tgctggattgcttgaagtggctgacccatctctttcaagtaaatatttcctccgccagca 977
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgctggattgcttgaagtggctgacccatctctttcaagtaaatatttcctccgccagca 240

                                                                        
Query: 978  ttggatggatgaatctgaagggtcaactgattctattcttaagcataagcctctttgggc 1037
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ttggatggatgaatctgaagggtcaactgattctattcttaagcataagcctctttgggc 300

                                                                        
Query: 1038 ttcatacaactcaaaacctggcaagaaaaggaagaaggaagtaaagaaacaaggggatct 1097
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttcatacaactcaaaacctggcaagaaaaggaagaaggaagtaaagaaacaaggggatct 360

                                                                        
Query: 1098 gcagccaacttatgggacaagagtagttcctgttttcgtgctatcattggcagatgtgga 1157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gcagccaacttatgggacaagagtagttcctgttttcgtgctatcattggcagatgtgga 420

                                                                        
Query: 1158 ttcaaatcttatgatggaggatgaaagtatggtgtggacaagcaatgatgttgttattgt 1217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ttcaaatcttatgatggaggatgaaagtatggtgtggacaagcaatgatgttgttattgt 480

                                                                        
Query: 1218 ccttgagcatcaaaatgctaaaattcctttaagttatgtttcagaaacatatagaaggca 1277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ccttgagcatcaaaatgctaaaattcctttaagttatgtttcagaaacatatagaaggca 540

                                                                        
Query: 1278 tgctcttccatctcaagcacaacggcatatattggccggtattgcctcagttgtaggtgg 1337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tgctcttccatctcaagcacaacggcatatattggccggtattgcctcagttgtaggtgg 600

                                                                        
Query: 1338 tttaagtgcaccatatgagaaggcttctcatgtacatgaaagacctgttgtgaattggct 1397
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 601  tttaagtgcaccatatgagaaggcttctcatgtacatgaaagacctgttgcgaattggct 660

                                                                        
Query: 1398 ttgggcagctggttgtcatccatttggacccttttctaatacatctcacatcagtcaaat 1457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  ttgggcagctggttgtcatccatttggacccttttctaatacatctcacatcagtcaaat 720

                                                                        
Query: 1458 gctccgtgatgttgctttgaggaactcaatatatgcacgtgtggattctgtccttcgtaa 1517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  gctccgtgatgttgctttgaggaactcaatatatgcacgtgtggattctgtccttcgtaa 780

                 
Query: 1518 aattc 1522
            |||||
Sbjct: 781  aattc 785