Miyakogusa Predicted Gene
- Lj4g3v2263920.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2263920.2 Non Chatacterized Hit- tr|I1MRT0|I1MRT0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10109
PE,74.51,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
RNA recognition motif,RNA recognition mot,CUFF.50625.2
(2292 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70561 similar to UniRef100_Q531A8 Cluster: FCA gamma;... 652 0.0
gnl|LJGI|TC79404 similar to UniRef100_A7Q8S7 Cluster: Chromosome... 293 2e-78
gnl|LJGI|BP034279 homologue to UniRef100_Q531A8 Cluster: FCA gam... 220 3e-56
>gnl|LJGI|TC70561 similar to UniRef100_Q531A8 Cluster: FCA gamma; n=1; Pisum
sativum|Rep: FCA gamma - Pisum sativum (Garden pea),
partial (5%)
Length = 650
Score = 652 bits (329), Expect = 0.0
Identities = 329/329 (100%)
Strand = Plus / Plus
Query: 1964 catatgctcagcagtctcgaacgcagtcacagccttcagttcttgccgcccagcaagttg 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catatgctcagcagtctcgaacgcagtcacagccttcagttcttgccgcccagcaagttg 60
Query: 2024 cacaaatccaacaggctcagcctcaaagtaatctccaaggacaggttttcaaccagcaac 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacaaatccaacaggctcagcctcaaagtaatctccaaggacaggttttcaaccagcaac 120
Query: 2084 aaatgcagctgccctctgtgtcttcttcgttccaggcatatggagttacaggtcatcaaa 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgcagctgccctctgtgtcttcttcgttccaggcatatggagttacaggtcatcaaa 180
Query: 2144 ataatcaggaagttggttttaaacaattacaggcatcagctatatcaggtggtgatccta 2203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataatcaggaagttggttttaaacaattacaggcatcagctatatcaggtggtgatccta 240
Query: 2204 gacgctactcacagtttcagggtatgaatactgcacaagagttgatgtggaaaaataagc 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacgctactcacagtttcagggtatgaatactgcacaagagttgatgtggaaaaataagc 300
Query: 2264 ctgcaggtttcaattcaggagtttaaact 2292
|||||||||||||||||||||||||||||
Sbjct: 301 ctgcaggtttcaattcaggagtttaaact 329
>gnl|LJGI|TC79404 similar to UniRef100_A7Q8S7 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 523
Score = 293 bits (148), Expect = 2e-78
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 2145 taatcaggaagttggttttaaacaattacaggcatcagctatatcaggtggtgatcctag 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatcaggaagttggttttaaacaattacaggcatcagctatatcaggtggtgatcctag 60
Query: 2205 acgctactcacagtttcagggtatgaatactgcacaagagttgatgtggaaaaataagcc 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgctactcacagtttcagggtatgaatactgcacaagagttgatgtggaaaaataagcc 120
Query: 2265 tgcaggtttcaattcaggagtttaaact 2292
||||||||||||||||||||||||||||
Sbjct: 121 tgcaggtttcaattcaggagtttaaact 148
>gnl|LJGI|BP034279 homologue to UniRef100_Q531A8 Cluster: FCA gamma; n=1; Pisum
sativum|Rep: FCA gamma - Pisum sativum (Garden pea),
partial (5%)
Length = 544
Score = 220 bits (111), Expect = 3e-56
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 358 tctgttcctcgaaccgcctgtgaagaagatattcgccctttgtttgaggaacatgggaat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctgttcctcgaaccgcctgtgaagaagatattcgccctttgtttgaggaacatgggaat 485
Query: 418 gtgattgaggttgccttaatcaaagatagaaagacaggacagcatcaaggt 468
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtgattgaggttgccttaatcaaagatagaaagacaggacagcatcaaggt 434