Miyakogusa Predicted Gene
- Lj4g3v2253520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2253520.1 CUFF.50590.1
(984 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60452 similar to UniRef100_Q4W8C1 Cluster: Gibberelli... 1951 0.0
gnl|LJGI|TC71530 similar to UniRef100_Q6TN17 Cluster: Gibberelli... 371 e-102
gnl|LJGI|BP046222 similar to UniRef100_Q6TN17 Cluster: Gibberell... 127 1e-28
gnl|LJGI|TC74794 homologue to UniRef100_Q4W8C1 Cluster: Gibberel... 100 3e-20
gnl|LJGI|TC77374 similar to UniRef100_Q4W8C0 Cluster: Gibberelli... 62 7e-09
>gnl|LJGI|TC60452 similar to UniRef100_Q4W8C1 Cluster: Gibberellin 2-oxidase; n=1;
Vigna angularis|Rep: Gibberellin 2-oxidase - Phaseolus
angularis (Adzuki bean) (Vigna angularis), partial (96%)
Length = 1464
Score = 1951 bits (984), Expect = 0.0
Identities = 984/984 (100%)
Strand = Plus / Plus
Query: 1 atggtgttggcttccagaaacccaatcaggagtgaaaaaattgtacctggtgatcttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atggtgttggcttccagaaacccaatcaggagtgaaaaaattgtacctggtgatcttccc 327
Query: 61 atagtagacctcaaagctgaaaaatctgaggtgacaaggctcattgtgaaagcaagtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atagtagacctcaaagctgaaaaatctgaggtgacaaggctcattgtgaaagcaagtgaa 387
Query: 121 gaatatggttttttcaaagtgatcaaccatggtattagccatgaaactattgccaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gaatatggttttttcaaagtgatcaaccatggtattagccatgaaactattgccaaaatg 447
Query: 181 gaagaagcagggtttgggttctttgccaaaccaatgcctcaaaagaaacaggctgcacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaagaagcagggtttgggttctttgccaaaccaatgcctcaaaagaaacaggctgcacct 507
Query: 241 ggttatggttgtaagaacattggcttcaatggagacatgggtgaggttgagtaccttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggttatggttgtaagaacattggcttcaatggagacatgggtgaggttgagtaccttctg 567
Query: 301 ctcaatgctaacactccttccattgctcagatatccaaaagtgtatccattgacccatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctcaatgctaacactccttccattgctcagatatccaaaagtgtatccattgacccatca 627
Query: 361 aacttcaggtctacagtgagtgcatacacagaagcagtgagggagctggcatgtgagata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aacttcaggtctacagtgagtgcatacacagaagcagtgagggagctggcatgtgagata 687
Query: 421 ttggaggtaatggcagagggcctgggggtccaggacacattggttttcagcaggttgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ttggaggtaatggcagagggcctgggggtccaggacacattggttttcagcaggttgata 747
Query: 481 agggatattgaaagtgactcagtcttgaggctcaatcactacccacctatacttaacagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 agggatattgaaagtgactcagtcttgaggctcaatcactacccacctatacttaacagc 807
Query: 541 aacaacagggaggacaagtcaccctcctacaacaacaaggttgggtttggggagcattct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 aacaacagggaggacaagtcaccctcctacaacaacaaggttgggtttggggagcattct 867
Query: 601 gaccctcagatcttgaccattctcagatccaatgacgtatctggcctccaaatctctctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gaccctcagatcttgaccattctcagatccaatgacgtatctggcctccaaatctctctt 927
Query: 661 caagatggggtgtggatcccagtcaagcctgaccctgaggctttctgtgttaacgtaggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 caagatggggtgtggatcccagtcaagcctgaccctgaggctttctgtgttaacgtaggt 987
Query: 721 gatgtactagaggttatgacaaatggaagatttgtgagcgtgagacacagggctatgacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 gatgtactagaggttatgacaaatggaagatttgtgagcgtgagacacagggctatgacc 1047
Query: 781 aactcattcaaatcaagaatgtcaatggcatattttggggctccaccactgcatgcttgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 aactcattcaaatcaagaatgtcaatggcatattttggggctccaccactgcatgcttgt 1107
Query: 841 attgttgctcctccagttttggttacacccgagaggccctccctcttccgaccattcacc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 attgttgctcctccagttttggttacacccgagaggccctccctcttccgaccattcacc 1167
Query: 901 tgggccgactacaagaaagccacatactctctcaggcttggagacagccgcatggaactt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 tgggccgactacaagaaagccacatactctctcaggcttggagacagccgcatggaactt 1227
Query: 961 ttcagaaacaataatgatatgtag 984
||||||||||||||||||||||||
Sbjct: 1228 ttcagaaacaataatgatatgtag 1251
>gnl|LJGI|TC71530 similar to UniRef100_Q6TN17 Cluster: Gibberellin 2-oxidase; n=1;
Populus alba x Populus tremuloides|Rep: Gibberellin
2-oxidase - Populus alba x Populus tremuloides, partial
(20%)
Length = 675
Score = 371 bits (187), Expect = e-102
Identities = 230/245 (93%), Gaps = 7/245 (2%)
Strand = Plus / Plus
Query: 496 gactcagtcttgaggctcaatcactacccaccta-------tacttaacagcaacaacag 548
|||||||||||||||||||||||||||||||||| ||| |||||||||||| ||
Sbjct: 1 gactcagtcttgaggctcaatcactacccacctaatacctatacataacagcaacaatag 60
Query: 549 ggaggacaagtcaccctcctacaacaacaaggttgggtttggggagcattctgaccctca 608
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaagacaagtcacccccctacaacaacaaggttgggtttggggagcattctgaccctca 120
Query: 609 gatcttgaccattctcagatccaatgacgtatctggcctccaaatctctcttcaagatgg 668
||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||
Sbjct: 121 aatcttgaccattctcagatccaatgacgtgtgtggcctccaaatctctcttcaagaagg 180
Query: 669 ggtgtggatcccagtcaagcctgaccctgaggctttctgtgttaacgtaggtgatgtact 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgtggatcccagtcaagcctgaccctgaggctttctgtgttaacgtaggtgatgtact 240
Query: 729 agagg 733
|||||
Sbjct: 241 agagg 245
>gnl|LJGI|BP046222 similar to UniRef100_Q6TN17 Cluster: Gibberellin 2-oxidase; n=1;
Populus alba x Populus tremuloides|Rep: Gibberellin
2-oxidase - Populus alba x Populus tremuloides, partial
(6%)
Length = 418
Score = 127 bits (64), Expect = 1e-28
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 662 aagatggggtgtggatcccagtcaagcctgaccctgaggctttctgtgttaacgtaggtg 721
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aagaaggggtgtggatccaagtcaagcctgaccctgaggctttctgtgttaacgtaggtg 359
Query: 722 atgtactagagg 733
||||||||||||
Sbjct: 358 atgtactagagg 347
>gnl|LJGI|TC74794 homologue to UniRef100_Q4W8C1 Cluster: Gibberellin 2-oxidase; n=1;
Vigna angularis|Rep: Gibberellin 2-oxidase - Phaseolus
angularis (Adzuki bean) (Vigna angularis), partial (5%)
Length = 520
Score = 99.6 bits (50), Expect = 3e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 472 aggttgataagggatattgaaagtgactcagtcttgaggctcaatcacta 521
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aggttgataagggatattgaaagtgactcagtcttgaggctcaatcacta 57
>gnl|LJGI|TC77374 similar to UniRef100_Q4W8C0 Cluster: Gibberellin 2-oxidase; n=1;
Vigna angularis|Rep: Gibberellin 2-oxidase - Phaseolus
angularis (Adzuki bean) (Vigna angularis), partial (90%)
Length = 1338
Score = 61.9 bits (31), Expect = 7e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 737 tgacaaatggaagatttgtgagcgtgagacacagggctatgac 779
||||||||||||| |||||||||||||||||| ||||| ||||
Sbjct: 832 tgacaaatggaaggtttgtgagcgtgagacaccgggctttgac 874
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 579 ggttgggtttggggagcattctgaccctcagatcttgaccat 620
|||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 674 ggttggatttggcgagcattctgaccctcagatcttaaccat 715