Miyakogusa Predicted Gene
- Lj4g3v2249140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2249140.1 Non Chatacterized Hit- tr|K4CCJ0|K4CCJ0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,23.91,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_3,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAM,CUFF.50564.1
(1488 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77126 similar to UniRef100_A7NVY2 Cluster: Chromosome... 1649 0.0
gnl|LJGI|TC77482 similar to UniRef100_A7NVY2 Cluster: Chromosome... 904 0.0
>gnl|LJGI|TC77126 similar to UniRef100_A7NVY2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 901
Score = 1649 bits (832), Expect = 0.0
Identities = 838/840 (99%)
Strand = Plus / Plus
Query: 1 atggcttccatatccctttcgttctcttcttccatcgtcccctctccgatttcccaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atggcttccatatccctttcgttctcttcttccatcgtcccctctccgatttcccaccac 121
Query: 61 aaatgcaagaaaacccaacaccccagttcccaaaatccaatctttcgtgtaacccactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaatgcaagaaaacccaacaccccagttcccaaaatccaatctttcgtgtaacccactgc 181
Query: 121 gcaatttcatctccaccgtccaaaactgcacctccggttgtcaaaaagaaacactggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcaatttcatctccaccgtccaaaactgcacctccggttgtcaaaaagaaacactggaaa 241
Query: 181 cgaggtgagtttcctggtacttcggaacctgggagtacgaggaagggtggtcccattaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 242 cgaggtgagtttcctggtacttcggaacctgggagtacgaggaagggtggtcccgttaag 301
Query: 241 aatttgaagaagaagctcgacagaaagaacaatgctaaagcttgggtcaacactgtcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatttgaagaagaagctcgacagaaagaacaatgctaaagcttgggtcaacactgtcact 361
Query: 301 gaagacctatctgaacgcattgagaagaagcaatggcttcaagcccttgaggtatttgac 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaggacctatctgaacgcattgagaagaagcaatggcttcaagcccttgaggtatttgac 421
Query: 361 atgcttaaagaacattccttttatgaacccaaagaagggacttacatgaagctcattgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgcttaaagaacattccttttatgaacccaaagaagggacttacatgaagctcattgtg 481
Query: 421 ttgcttggaaaatccggtcaaccccaccgtgcccggcaactttttactacaatgattgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgcttggaaaatccggtcaaccccaccgtgcccggcaactttttactacaatgattgaa 541
Query: 481 gaaggttgtgacccttctcctgaaacgtacacggcgttacttgctgcatattgcaggagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaaggttgtgacccttctcctgaaacgtacacggcgttacttgctgcatattgcaggagc 601
Query: 541 aacctgcttgatgaggcattttcgattttgaatgagatgaagaaccatcctctgtgccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aacctgcttgatgaggcattttcgattttgaatgagatgaagaaccatcctctgtgccag 661
Query: 601 cctgatgttttcacttacagtaccttaataaagccctgtgtggatgctttcaaatttgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cctgatgttttcacttacagtaccttaataaagccctgtgtggatgctttcaaatttgac 721
Query: 661 cttgttgagttgctgtatgaagatatggctgcgagatctatcatgcctaacacggtcact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cttgttgagttgctgtatgaagatatggctgcgagatctatcatgcctaacacggtcact 781
Query: 721 cagaacattgttttgagtggttatggcaaggctgggaagtttgatcagatggagaaagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 cagaacattgttttgagtggttatggcaaggctgggaagtttgatcagatggagaaagtg 841
Query: 781 ctgtcgagcatgcttgagagcacttcgtgcaagcctgatgtctggacaatgaacacaatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ctgtcgagcatgcttgagagcacttcgtgcaagcctgatgtctggacaatgaacacaatc 901
>gnl|LJGI|TC77482 similar to UniRef100_A7NVY2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (30%)
Length = 859
Score = 904 bits (456), Expect = 0.0
Identities = 477/484 (98%)
Strand = Plus / Plus
Query: 1005 gcggaagttgcaatttccatggaccacctctacttataacaatgtgattgaggcatttac 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggaagttgcaatttccatggaccacctctacttataacaatgtgattgaggcatttac 60
Query: 1065 agatgttggtgatgctaaaaacatggagtatacatttgatcagatgcgtgctgagggtat 1124
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 agatgttggtgatgctaaaaccatggagtatgcatttgatcagatgcgtgctgagggtat 120
Query: 1125 gaaagcagattccaagactttctgctgccttatcaatggttttgcaaatgcaggtctctt 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaagcagattccaagactttctgctgccttatcaatggttttgcaaatgcaggtctctt 180
Query: 1185 ccataaagtaattagcactgttcagttggctgagaagtttgagatagctgagaacaccac 1244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 ccataaagtaattagcactgttcagttggctgagaagtttgagatagctgtgaacaccac 240
Query: 1245 attttacaacgcagtattatctgcatgtacaaaggcagaggacttgatggaaatggagag 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attttacaacgcagtattatctgcatgtacaaaggcagaggacttgatggaaatggagag 300
Query: 1305 agttttcaagcgaatgaaagataaccaatgtccaccagatgacacaacatacacgatcat 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agttttcaagcgaatgaaagataaccaatgtccaccagatgacacaacatacacgatcat 360
Query: 1365 gatcgaggcatatagaaaagagggtatgaatgacaagatatactatttagagcaggagaa 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 361 gatcgaggcatatagaaaagagggtatgaatgacaagatatactatttagagccggagaa 420
Query: 1425 gaaaacaatgataactgatggtataaaagtgagccagccggaggatgaattcttcagttg 1484
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 421 gaaaaccatgataactgatggtataaaagtgagcccgccggaggatgaattcttccgttg 480
Query: 1485 attc 1488
||||
Sbjct: 481 attc 484