Miyakogusa Predicted Gene

Lj4g3v2215590.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2215590.1 Non Chatacterized Hit- tr|B4FE34|B4FE34_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,75,9e-17,Tmemb_14,Uncharacterised protein family UPF0136,
Transmembrane; seg,NULL; TRANSMEMBRANE PROTEIN 14, ,CUFF.50538.1
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58870                                                     1350   0.0  

>gnl|LJGI|TC58870 
          Length = 821

 Score = 1350 bits (681), Expect = 0.0
 Identities = 681/681 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagaagcagttgctactttcgccatttccagttcaacttcactccctctccgccgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12  atggcagaagcagttgctactttcgccatttccagttcaacttcactccctctccgccgc 71

                                                                       
Query: 61  acaccgatttacagttaccgatctcaatcttccactcttcgcttccttccctctcgtttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  acaccgatttacagttaccgatctcaatcttccactcttcgcttccttccctctcgtttt 131

                                                                       
Query: 121 cccgcgttcggttactcagctcgttccgaccgccacgtgtacgccgctgtagtctcttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cccgcgttcggttactcagctcgttccgaccgccacgtgtacgccgctgtagtctcttcc 191

                                                                       
Query: 181 gattccataactgctccagttattactcctgagttggatactactggtcctggcggtggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gattccataactgctccagttattactcctgagttggatactactggtcctggcggtggt 251

                                                                       
Query: 241 agcgtcggagacggaaagggttttggcggaggaggcggcggaggtgacggtggaggtggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agcgtcggagacggaaagggttttggcggaggaggcggcggaggtgacggtggaggtggt 311

                                                                       
Query: 301 ggtgataacaaagacgaggaaggagaaggatcggacggtgacgagaggaagatgggtttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggtgataacaaagacgaggaaggagaaggatcggacggtgacgagaggaagatgggtttg 371

                                                                       
Query: 361 tcaatgtcgcagaaattgactctaggttatgctgccctcgtcggagtgggtggtttaatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcaatgtcgcagaaattgactctaggttatgctgccctcgtcggagtgggtggtttaatg 431

                                                                       
Query: 421 ggctatctcaagagtggtagccagaagtcacttttggctgggggcttgtctgccttgctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggctatctcaagagtggtagccagaagtcacttttggctgggggcttgtctgccttgctg 491

                                                                       
Query: 481 ctgtattatgttcatactgagctacctttaaggcctgtctttgcatcatctctgggcctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctgtattatgttcatactgagctacctttaaggcctgtctttgcatcatctctgggcctt 551

                                                                       
Query: 541 ggtatatctgctgcacttcttgcggtgatgggttctcgttttaagaaatcagggaaagtc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggtatatctgctgcacttcttgcggtgatgggttctcgttttaagaaatcagggaaagtc 611

                                                                       
Query: 601 tttccagcaggtgttgtgtcacttgtgtcactcataatgaccggcggttacttgcatgga 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tttccagcaggtgttgtgtcacttgtgtcactcataatgaccggcggttacttgcatgga 671

                                
Query: 661 attatgcgcagtgcacactag 681
           |||||||||||||||||||||
Sbjct: 672 attatgcgcagtgcacactag 692