Miyakogusa Predicted Gene
- Lj4g3v2215580.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2215580.2 tr|B9HCN5|B9HCN5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_819435 PE=4
SV=1,41.48,3e-18,tify,Tify; CCT_2,CO/COL/TOC1, conserved site;
TIFY,Tify; no description,Tify,CUFF.50530.2
(519 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57399 similar to UniRef100_A2Q3Z0 Cluster: ZIM; n=1; ... 1029 0.0
gnl|LJGI|GO032006 weakly similar to UniRef100_A2Q3Z0 Cluster: ZI... 759 0.0
gnl|LJGI|TC57980 similar to UniRef100_A2Q3Z0 Cluster: ZIM; n=1; ... 121 5e-27
gnl|LJGI|TC57916 similar to UniRef100_A2Q3Z0 Cluster: ZIM; n=1; ... 121 5e-27
>gnl|LJGI|TC57399 similar to UniRef100_A2Q3Z0 Cluster: ZIM; n=1; Medicago
truncatula|Rep: ZIM - Medicago truncatula (Barrel
medic), partial (42%)
Length = 929
Score = 1029 bits (519), Expect = 0.0
Identities = 519/519 (100%)
Strand = Plus / Plus
Query: 1 atggcttgtgtgaaccacgaggcagagatttttgcagcttctcctcaatctcttgctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 atggcttgtgtgaaccacgaggcagagatttttgcagcttctcctcaatctcttgctgat 87
Query: 61 agtaatggaaggaatgacagcatggaggttcagaacaacctcagtgatgaagggtcggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 agtaatggaaggaatgacagcatggaggttcagaacaacctcagtgatgaagggtcggtg 147
Query: 121 aagcatttctctaacaacaacaggccaatgccagcatctgggctgaatgtagtaacccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aagcatttctctaacaacaacaggccaatgccagcatctgggctgaatgtagtaacccct 207
Query: 181 ggtaggactcagttcgccatctactataatgggagtatgcatgtctatgatggaatccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggtaggactcagttcgccatctactataatgggagtatgcatgtctatgatggaatccct 267
Query: 241 gctgaaaaggtgcatgaaataatgttgattgctgctgctgccaagtctgctgaaatgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gctgaaaaggtgcatgaaataatgttgattgctgctgctgccaagtctgctgaaatgaag 327
Query: 301 agtgggatccccttcatgtcactcattcccacaagcccttcttctccacaaggaacctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agtgggatccccttcatgtcactcattcccacaagcccttcttctccacaaggaacctct 387
Query: 361 aacagtttggcttctccaccatcagtcagctttcctgcagagaagagttccatttgcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aacagtttggcttctccaccatcagtcagctttcctgcagagaagagttccatttgcagg 447
Query: 421 ctgcaagaatttccaatagctcgcagacagtcacttcaaaggtttcttgagaagcgaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctgcaagaatttccaatagctcgcagacagtcacttcaaaggtttcttgagaagcgaaga 507
Query: 481 atgaggttgggtagcaaaaatccttataccaccaccaca 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atgaggttgggtagcaaaaatccttataccaccaccaca 546
>gnl|LJGI|GO032006 weakly similar to UniRef100_A2Q3Z0 Cluster: ZIM; n=1; Medicago
truncatula|Rep: ZIM - Medicago truncatula (Barrel
medic), partial (22%)
Length = 496
Score = 759 bits (383), Expect = 0.0
Identities = 383/383 (100%)
Strand = Plus / Plus
Query: 1 atggcttgtgtgaaccacgaggcagagatttttgcagcttctcctcaatctcttgctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atggcttgtgtgaaccacgaggcagagatttttgcagcttctcctcaatctcttgctgat 173
Query: 61 agtaatggaaggaatgacagcatggaggttcagaacaacctcagtgatgaagggtcggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 agtaatggaaggaatgacagcatggaggttcagaacaacctcagtgatgaagggtcggtg 233
Query: 121 aagcatttctctaacaacaacaggccaatgccagcatctgggctgaatgtagtaacccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aagcatttctctaacaacaacaggccaatgccagcatctgggctgaatgtagtaacccct 293
Query: 181 ggtaggactcagttcgccatctactataatgggagtatgcatgtctatgatggaatccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ggtaggactcagttcgccatctactataatgggagtatgcatgtctatgatggaatccct 353
Query: 241 gctgaaaaggtgcatgaaataatgttgattgctgctgctgccaagtctgctgaaatgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gctgaaaaggtgcatgaaataatgttgattgctgctgctgccaagtctgctgaaatgaag 413
Query: 301 agtgggatccccttcatgtcactcattcccacaagcccttcttctccacaaggaacctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agtgggatccccttcatgtcactcattcccacaagcccttcttctccacaaggaacctct 473
Query: 361 aacagtttggcttctccaccatc 383
|||||||||||||||||||||||
Sbjct: 474 aacagtttggcttctccaccatc 496
>gnl|LJGI|TC57980 similar to UniRef100_A2Q3Z0 Cluster: ZIM; n=1; Medicago
truncatula|Rep: ZIM - Medicago truncatula (Barrel
medic), partial (81%)
Length = 831
Score = 121 bits (61), Expect = 5e-27
Identities = 235/292 (80%), Gaps = 12/292 (4%)
Strand = Plus / Plus
Query: 197 ccatctactataatgggagtatgcatgtctatgatggaatccctgctgaaaaggtgcatg 256
|||||| ||||||||||||| | ||| ||||||||||||| || || || ||||||||||
Sbjct: 305 ccatcttctataatgggagtgttcatatctatgatggaataccggcagataaggtgcatg 364
Query: 257 aaataatgttgattgctgctgctgcc---aagtctgctgaaat---gaagagtgggatcc 310
|||||||| | ||||||||||||||| ||||||| ||||| ||||| ||| || |
Sbjct: 365 aaataatgcttattgctgctgctgccgccaagtctgttgaaacaaagaagattggaatgc 424
Query: 311 ------ccttcatgtcactcattcccacaagcccttcttctccacaaggaacctctaaca 364
|| |||| |||| ||||| |||| |||||||||||||| |||||| |||| |
Sbjct: 425 aatctcccatcatttcaccagttccctcaaggccttcttctccacatggaaccactaata 484
Query: 365 gtttggcttctccaccatcagtcagctttcctgcagagaagagttccatttgcaggctgc 424
| | ||||| | | | | ||||||||||| ||||||||||||| ||||||||||
Sbjct: 485 atattgcttcaacccaggaactttgctttcctgcaaagaagagttccatctgcaggctgc 544
Query: 425 aagaatttccaatagctcgcagacagtcacttcaaaggtttcttgagaagcg 476
|||||||||||||||| ||| | || ||||||||||| ||||||||||||||
Sbjct: 545 aagaatttccaatagcacgccgtcattcacttcaaagttttcttgagaagcg 596
>gnl|LJGI|TC57916 similar to UniRef100_A2Q3Z0 Cluster: ZIM; n=1; Medicago
truncatula|Rep: ZIM - Medicago truncatula (Barrel
medic), partial (71%)
Length = 1128
Score = 121 bits (61), Expect = 5e-27
Identities = 235/292 (80%), Gaps = 12/292 (4%)
Strand = Plus / Plus
Query: 197 ccatctactataatgggagtatgcatgtctatgatggaatccctgctgaaaaggtgcatg 256
|||||| ||||||||||||| | ||| ||||||||||||| || || || ||||||||||
Sbjct: 358 ccatcttctataatgggagtgttcatatctatgatggaataccggcagataaggtgcatg 417
Query: 257 aaataatgttgattgctgctgctgcc---aagtctgctgaaat---gaagagtgggatcc 310
|||||||| | ||||||||||||||| ||||||| ||||| ||||| ||| || |
Sbjct: 418 aaataatgcttattgctgctgctgccgccaagtctgttgaaacaaagaagattggaatgc 477
Query: 311 ------ccttcatgtcactcattcccacaagcccttcttctccacaaggaacctctaaca 364
|| |||| |||| ||||| |||| |||||||||||||| |||||| |||| |
Sbjct: 478 aatctcccatcatttcaccagttccctcaaggccttcttctccacatggaaccactaata 537
Query: 365 gtttggcttctccaccatcagtcagctttcctgcagagaagagttccatttgcaggctgc 424
| | ||||| | | | | ||||||||||| ||||||||||||| ||||||||||
Sbjct: 538 atattgcttcaacccaggaactttgctttcctgcaaagaagagttccatctgcaggctgc 597
Query: 425 aagaatttccaatagctcgcagacagtcacttcaaaggtttcttgagaagcg 476
|||||||||||||||| ||| | || ||||||||||| ||||||||||||||
Sbjct: 598 aagaatttccaatagcacgccgtcattcacttcaaagttttcttgagaagcg 649