Miyakogusa Predicted Gene

Lj4g3v2215490.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2215490.2 Non Chatacterized Hit- tr|I1JLK7|I1JLK7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,68,5.5,
,CUFF.50523.2
         (165 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82748 similar to UniRef100_A7PDN7 Cluster: Chromosome...   123   3e-28

>gnl|LJGI|TC82748 similar to UniRef100_A7PDN7 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (30%)
          Length = 1094

 Score =  123 bits (62), Expect = 3e-28
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgtgtacgagttctttaagatatggaactgctcacgcgatgaagctgatattcgtgttc 60
            |||||||| | ||||| |||||||||||||| ||||| ||||||||| |||  |||||||
Sbjct: 914  atgtgtaccaattcttcaagatatggaactgttcacgtgatgaagctaataaccgtgttc 973

                                                                        
Query: 61   atgagtttttcaagacaccatacttcaaatcagggatccaccctctcccaggtgctaaga 120
            |||||||||| || |||||||||||||| || |||||||||||  ||||||| ||| || 
Sbjct: 974  atgagttttttaacacaccatacttcaagtcggggatccaccccatcccaggcgctcagg 1033

                                                         
Query: 121  cagcacttcaaaagttatcaagattttgtagcctctcagttgtaa 165
              || || || || |||||||||||||||| ||| ||| ||||||
Sbjct: 1034 tggccctgcanaatttatcaagattttgtaacctatcaattgtaa 1078