Miyakogusa Predicted Gene

Lj4g3v2215110.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2215110.1 Non Chatacterized Hit- tr|G7L8E2|G7L8E2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,51.59,4e-19,seg,NULL; Auxin_inducible,Auxin responsive SAUR
protein,CUFF.50488.1
         (375 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74556 similar to UniRef100_A7PDR2 Cluster: Chromosome...   630   e-180

>gnl|LJGI|TC74556 similar to UniRef100_A7PDR2 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (77%)
          Length = 472

 Score =  630 bits (318), Expect = e-180
 Identities = 356/375 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccagaggaggcaaactaacgaagctgaagtccgccctaaaaaagtggaactcattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  atggccagaggaggcaaactaacgaagctgaagtccgccctaaaaaagtggaactcattc 139

                                                                       
Query: 61  agcagcaacggaagcgccaccaagcacagcagcagcgccgtcgccgacgacgagnnnnnn 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 140 agcagcaacggaagcgccaccaagcacagcagcagcgccgtcgccgacgacgagtcctcc 199

                                                                       
Query: 121 nnnnnnnnnnnnnaaaccgtctacgtcggcaaatcccgccgcctctaccgcgtctcctcc 180
                        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcctcctccctccaaaccgtctacgtcggcaaatcccgccgcctctaccgcgtctcctcc 259

                                                                       
Query: 181 gacgtcgtcgaccaccctgtcttccgtgaactcgtcgaacggtcacgtgaatcacagcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gacgtcgtcgaccaccctgtcttccgtgaactcgtcgaacggtcacgtgaatcacagcaa 319

                                                                       
Query: 241 aacgactccgactccgacgccgccgtcaacgtcgcctgcgaagtcgtcctcttcgaacac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacgactccgactccgacgccgccgtcaacgtcgcctgcgaagtcgtcctcttcgaacac 379

                                                                       
Query: 301 ctgctctggatgctcgagaatgctgaccctcaacctgactcgctcgatgaactcgccgat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgctctggatgctcgagaatgctgaccctcaacctgactcgctcgatgaactcgccgat 439

                          
Query: 361 ttctacgcttgctag 375
           |||||||||||||||
Sbjct: 440 ttctacgcttgctag 454