Miyakogusa Predicted Gene
- Lj4g3v2214790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2214790.1 Non Chatacterized Hit- tr|D8TRX1|D8TRX1_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,47.42,0.000000000000009,Cpn10,Chaperonin Cpn10; no
description,Chaperonin Cpn10; CHAPERONINS_CPN10,Chaperonin Cpn10,
conserv,CUFF.50462.1
(720 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63570 similar to UniRef100_A7PDS7 Cluster: Chromosome... 1427 0.0
gnl|LJGI|TC67283 similar to UniRef100_Q9M5A8 Cluster: Chaperonin... 416 e-116
>gnl|LJGI|TC63570 similar to UniRef100_A7PDS7 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1170
Score = 1427 bits (720), Expect = 0.0
Identities = 720/720 (100%)
Strand = Plus / Plus
Query: 1 atggcgacttctcagttcactgcatcatccatttccgccaggaacttgccatcccttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atggcgacttctcagttcactgcatcatccatttccgccaggaacttgccatcccttgaa 171
Query: 61 gggcttcgaccttcagctcttcaatttcatcatgttgggcgtgtcagaattgccactccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gggcttcgaccttcagctcttcaatttcatcatgttgggcgtgtcagaattgccactccc 231
Query: 121 actcagaagtggttcccctctctggttgtcaaagctgccactgttgtcgccccaaagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 actcagaagtggttcccctctctggttgtcaaagctgccactgttgtcgccccaaagcac 291
Query: 181 accgctattaagccgctcggtgatagagttttggtaaaaattaaggaggcagaagagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 accgctattaagccgctcggtgatagagttttggtaaaaattaaggaggcagaagagaag 351
Query: 241 actgtgggtgggattttactgcctagcactgctcaatcaaagcctcaaggaggtgaggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 actgtgggtgggattttactgcctagcactgctcaatcaaagcctcaaggaggtgaggtg 411
Query: 301 gttgctgttggagaagggaagtcaattgggaacaacaaagttgatattagtgtgaagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gttgctgttggagaagggaagtcaattgggaacaacaaagttgatattagtgtgaagaca 471
Query: 361 ggggcaaaagttgtatattcaaagtacgcagggactgaggtggagttcaatggttcaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggggcaaaagttgtatattcaaagtacgcagggactgaggtggagttcaatggttcaaag 531
Query: 421 catcttatactgaaggatgatgacatcgttggtatccttgaaactgatgaggtccaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 catcttatactgaaggatgatgacatcgttggtatccttgaaactgatgaggtccaggat 591
Query: 481 cttaaacccttgaatgacagagttttgataaaggttgcagcagctgaggagaaaactgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cttaaacccttgaatgacagagttttgataaaggttgcagcagctgaggagaaaactgct 651
Query: 541 gggggtttgttgctcacggaggcaaccaaggagaaaccatctattggaacagtgatagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gggggtttgttgctcacggaggcaaccaaggagaaaccatctattggaacagtgatagca 711
Query: 601 gctggtccaggtactctggatgaggaaggcaacagaaaaccgttgtctgttacacctggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gctggtccaggtactctggatgaggaaggcaacagaaaaccgttgtctgttacacctggg 771
Query: 661 agtacagttctgtactctaaatacgcggggaatgacttcaagggcaaagatggttctgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 agtacagttctgtactctaaatacgcggggaatgacttcaagggcaaagatggttctgaa 831
>gnl|LJGI|TC67283 similar to UniRef100_Q9M5A8 Cluster: Chaperonin 21 precursor; n=1;
Solanum lycopersicum|Rep: Chaperonin 21 precursor -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (93%)
Length = 1072
Score = 416 bits (210), Expect = e-116
Identities = 477/566 (84%)
Strand = Plus / Plus
Query: 154 gctgccactgttgtcgccccaaagcacaccgctattaagccgctcggtgatagagttttg 213
|||||||||||||| ||||| ||| ||| ||||||||||| || ||||| || || ||
Sbjct: 267 gctgccactgttgttgcccccaagttcactgctattaagcctctgggtgacagggtactg 326
Query: 214 gtaaaaattaaggaggcagaagagaagactgtgggtgggattttactgcctagcactgct 273
|||||||||||||| ||||||||||| || ||||| ||||| || || | ||||||
Sbjct: 327 gtaaaaattaaggaatcagaagagaagtctcaaggtggtattttgcttcccacaactgct 386
Query: 274 caatcaaagcctcaaggaggtgaggtggttgctgttggagaagggaagtcaattgggaac 333
||| | || |||||||| ||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 387 caaactaaacctcaagggggtgaggtggttgctgtcggagaaggaaagacaattgggaag 446
Query: 334 aacaaagttgatattagtgtgaagacaggggcaaaagttgtatattcaaagtacgcaggg 393
| | |||| || |||||||||| |||||| ||| ||||||| ||||||||||| |||||
Sbjct: 447 agccaagtggaaattagtgtgacgacaggtgcacaagttgtgtattcaaagtatgcaggt 506
Query: 394 actgaggtggagttcaatggttcaaagcatcttatactgaaggatgatgacatcgttggt 453
||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||
Sbjct: 507 actgaggtggaattcaatggtacaaagcatcttattttgaaggatgatgacattgttggc 566
Query: 454 atccttgaaactgatgaggtccaggatcttaaacccttgaatgacagagttttgataaag 513
|||||||||||||| || || ||||||||||||| |||||||| |||||| | ||||||
Sbjct: 567 atccttgaaactgaagacatcaaggatcttaaaccattgaatgatagagttctcataaag 626
Query: 514 gttgcagcagctgaggagaaaactgctgggggtttgttgctcacggaggcaaccaaggag 573
||||||| |||||| || |||||||| || |||||||| || || |||||||||||||||
Sbjct: 627 gttgcagtagctgaagaaaaaactgcaggcggtttgttacttacagaggcaaccaaggag 686
Query: 574 aaaccatctattggaacagtgatagcagctggtccaggtactctggatgaggaaggcaac 633
||||| || || |||||||||||||||| |||||| || |||| | |||||||||||
Sbjct: 687 aaaccttccatcggaacagtgatagcagttggtcctggacctcttggcgaggaaggcaag 746
Query: 634 agaaaaccgttgtctgttacacctgggagtacagttctgtactctaaatacgcggggaat 693
|||||||| || | || | ||||| | |||||| ||||||| ||||| || ||||||
Sbjct: 747 agaaaacctctggccattgctcctggaaacacagttttgtactccaaatatgcagggaat 806
Query: 694 gacttcaagggcaaagatggttctga 719
||||| ||||||||||||||||||||
Sbjct: 807 gactttaagggcaaagatggttctga 832