Miyakogusa Predicted Gene

Lj4g3v2179260.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2179260.1 Non Chatacterized Hit- tr|K3ZXA5|K3ZXA5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si031237,64.06,2e-19,seg,NULL; GCK,GCK;
coiled-coil,NULL,CUFF.50426.1
         (355 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69249 similar to UniRef100_A7NUJ1 Cluster: Chromosome...   426   e-119

>gnl|LJGI|TC69249 similar to UniRef100_A7NUJ1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 533

 Score =  426 bits (215), Expect = e-119
 Identities = 302/333 (90%), Gaps = 21/333 (6%)
 Strand = Plus / Plus

                                                                       
Query: 11  cgccgcagcagcaacccgttgaggacaaacccgaactcccttctccggcgg------cgg 64
           |||||| ||||||||||||||||||||||||||| | ||||||||||||||      |||
Sbjct: 45  cgccgccgcagcaacccgttgaggacaaacccgaccacccttctccggcggagcctacgg 104

                                                                       
Query: 65  aagcgg---aaacagagaacgatgaggaggaagaagaaggcgagtgcgggttctgcctgt 121
            |||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 cagcggcggaaacagagaacgatgaggaggaagaagaaggcgagtgcgggttctgcctgt 164

                                                                       
Query: 122 tcatgaaaggcggtggttgcaaggattccttcatcgattgggaaaattgcgtgcaagaag 181
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 165 tcatgaaaggcggtggttgcaaggattccttcatcgattgggagaattgcgtgcaagaag 224

                                                                       
Query: 182 ccgagaagaacaacgaggacctcgtcgaaaagtgcgctcaggtcacggcgaggctcaagc 241
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 225 ccgagaagaacaacgaggacctcgtcgaaaagtgtgctcaggtcacggcgaggctgaagc 284

                                                                       
Query: 242 agtgtatggatgctcatgccgattactacgaacccattctccgcgcc------------g 289
           ||||||||||||| ||||||||||||||||||||||||||| | |||            |
Sbjct: 285 agtgtatggatgcccatgccgattactacgaacccattctcagagccgagaaggttgctg 344

                                            
Query: 290 aagaacaagccctcgccgaattggagaatgaga 322
           |||||||||||||||||||||||||||||||||
Sbjct: 345 aagaacaagccctcgccgaattggagaatgaga 377