Miyakogusa Predicted Gene

Lj4g3v2179250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2179250.1 Non Chatacterized Hit- tr|I1LY32|I1LY32_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52116
PE,67.32,0,TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED,CCAAT-binding
transcription factor, subunit B; CCAAT-Binding,CUFF.50425.1
         (576 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57894 similar to UniRef100_O49915 Cluster: RAPB prote...   244   5e-64

>gnl|LJGI|TC57894 similar to UniRef100_O49915 Cluster: RAPB protein; n=1; Oryza
           sativa|Rep: RAPB protein - Oryza sativa (Rice), partial
           (31%)
          Length = 847

 Score =  244 bits (123), Expect = 5e-64
 Identities = 186/207 (89%)
 Strand = Plus / Plus

                                                                       
Query: 75  tatgccgggattagcatcctccagaatagcgttaccacttgatcttgcagaagatgggcc 134
           ||||| |||||| |||||| | ||| | || |||||||||||||||||| ||||||| ||
Sbjct: 283 tatgctgggattggcatccactagagttgcattaccacttgatcttgcacaagatggacc 342

                                                                       
Query: 135 tatttacgtgaatgcaaaacaataccatggtatactgagaagacgacagtcacgagcaaa 194
            ||||| || ||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 343 catttatgtcaatgcgaagcaataccatggtatactgagaaggcgacagtcacgagcaaa 402

                                                                       
Query: 195 gcttgaggctcgaaacaaactcatcaaaagtcgtaagccatatcttcatgagtcccggca 254
           ||||||||| |  ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 403 gcttgaggcacagaacaaactcatcaaaagtcgtaagccatatcttcacgagtctcggca 462

                                      
Query: 255 ccgccatgcattgaatagggttagggg 281
           ||||||||| |||||||||||||||||
Sbjct: 463 ccgccatgctttgaatagggttagggg 489