Miyakogusa Predicted Gene
- Lj4g3v2172970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2172970.1 Non Chatacterized Hit- tr|I1LY19|I1LY19_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.16,0,FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.50400.1
(3921 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80833 similar to UniRef100_A7PE35 Cluster: Chromosome... 2198 0.0
gnl|LJGI|TC63468 similar to UniRef100_A7PE35 Cluster: Chromosome... 333 5e-90
gnl|LJGI|BW624038 similar to UniRef100_A6LBU2 Cluster: Transcrip... 151 4e-35
gnl|LJGI|GO019794 weakly similar to UniRef100_A7PE35 Cluster: Ch... 123 9e-27
>gnl|LJGI|TC80833 similar to UniRef100_A7PE35 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1463
Score = 2198 bits (1109), Expect = 0.0
Identities = 1112/1113 (99%)
Strand = Plus / Plus
Query: 2809 gaggaacttttccaaggacaggtttccaagaagaaaggcatgctggatggattattgaaa 2868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaacttttccaaggacaggtttccaagaagaaaggcatgctggatggattattgaaa 60
Query: 2869 tctgcctcaatggaaaaagaacttcaagaaaaggaatttgatcaacgtgctctagaaaaa 2928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgcctcaatggaaaaagaacttcaagaaaaggaatttgatcaacgtgctctagaaaaa 120
Query: 2929 ctcgttttaatggcttatgagaaatacatggcttgttggggtcctagtccctcgggtggg 2988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcgttttaatggcttatgagaaatacatggcttgttggggtcctagtccctcgggtggg 180
Query: 2989 aaaaattcaagcagcagaatggccaagcaagctgctttgggatttgttaaacgtacattg 3048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaaattcaagcagcagaatggccaagcaagctgctttgggatttgttaaacgtacattg 240
Query: 3049 gaccggtgccatcaatttgaagatacaggcaagagctgctttagtgagccgttattcaag 3108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaccggtgccatcaatttgaagatacaggcaagagctgctttagtgagccgttattcaag 300
Query: 3109 gatatgttcctgactgcttcctcccagcttagtaacgttcggctatcagatggaatggag 3168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatatgttcctgactgcttcctcccagcttagtaacgttcggctatcagatggaatggag 360
Query: 3169 actgaatcctcaaaaccatatgcttctccacttcctctggaagcaagaacagtttcaatg 3228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgaatcctcaaaaccatatgcttctccacttcctctggaagcaagaacagtttcaatg 420
Query: 3229 ggttcacagcagagcccatcacaatttattcagaatatggataatcatgatttcaatgca 3288
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggttcacaacagagcccatcacaatttattcagaatatggataatcatgatttcaatgca 480
Query: 3289 tcagacatgcttcctgctttgaatcattcctctgaacaaactattggaaaggaagatatt 3348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcagacatgcttcctgctttgaatcattcctctgaacaaactattggaaaggaagatatt 540
Query: 3349 tggtctagcagggtgaaaaagagggaattgttccttgatgatgttggtggtactcatggt 3408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggtctagcagggtgaaaaagagggaattgttccttgatgatgttggtggtactcatggt 600
Query: 3409 acttcaagtgctgcaggtgttggaagttctctaacaagcagtgcaaaggggaagaggagt 3468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acttcaagtgctgcaggtgttggaagttctctaacaagcagtgcaaaggggaagaggagt 660
Query: 3469 gatagagatggaaaggggcacagcagagaggtactatccagaaatggaactaccaaagtt 3528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatagagatggaaaggggcacagcagagaggtactatccagaaatggaactaccaaagtt 720
Query: 3529 ggtaggccagcatcatccagtgcaaagggagaaagaaaatccaaggcaaagcctaagcag 3588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggtaggccagcatcatccagtgcaaagggagaaagaaaatccaaggcaaagcctaagcag 780
Query: 3589 aaagcaactcagcattctgtttctgtaaatggcctccttggcaagctaccagaacaacca 3648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaagcaactcagcattctgtttctgtaaatggcctccttggcaagctaccagaacaacca 840
Query: 3649 aaaccagaacgcccttctgtttccaagtctaatgaactgtgtactaacagcactgccaaa 3708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaaccagaacgcccttctgtttccaagtctaatgaactgtgtactaacagcactgccaaa 900
Query: 3709 gaaaaagatgagtgtggcatgggtgggttggatgagcacgagcctattgatttgtccaac 3768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaaaaagatgagtgtggcatgggtgggttggatgagcacgagcctattgatttgtccaac 960
Query: 3769 ctggcactacccggaatggatgaccttactgaccaaggtcaggatcttggttcatggttg 3828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctggcactacccggaatggatgaccttactgaccaaggtcaggatcttggttcatggttg 1020
Query: 3829 aatattgatgacgatgcgttacaagatcatgactttatgggccttgagattcccatggat 3888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aatattgatgacgatgcgttacaagatcatgactttatgggccttgagattcccatggat 1080
Query: 3889 gacctttcagacttgaatatgatggtttgaagc 3921
|||||||||||||||||||||||||||||||||
Sbjct: 1081 gacctttcagacttgaatatgatggtttgaagc 1113
>gnl|LJGI|TC63468 similar to UniRef100_A7PE35 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 881
Score = 333 bits (168), Expect = 5e-90
Identities = 404/483 (83%), Gaps = 6/483 (1%)
Strand = Plus / Plus
Query: 3434 gttctctaacaagcagtgcaaaggggaagaggagtgatagag------atggaaaggggc 3487
|||| ||| |||||||||||| |||||||||||||| |||| ||||||| ||||
Sbjct: 26 gttcgctatcaagcagtgcaagagggaagaggagtgagagagacagagatggaaaagggc 85
Query: 3488 acagcagagaggtactatccagaaatggaactaccaaagttggtaggccagcatcatcca 3547
| ||||| || || |||||||||||||||| |||||||||||| ||||||||| ||| |
Sbjct: 86 agagcagggaagtgctatccagaaatggaaataccaaagttggccggccagcattatcta 145
Query: 3548 gtgcaaagggagaaagaaaatccaaggcaaagcctaagcagaaagcaactcagcattctg 3607
||| ||||||||||| ||| | || | |||||||||||||||||| ||||||||||||
Sbjct: 146 atgctaagggagaaaggaaacctaaatctaagcctaagcagaaagcatctcagcattctg 205
Query: 3608 tttctgtaaatggcctccttggcaagctaccagaacaaccaaaaccagaacgcccttctg 3667
||||||||||||||||||||||||||||| |||| || | |||||||| |||||||
Sbjct: 206 tttctgtaaatggcctccttggcaagctatcagatcattctaaaccagagttgccttctg 265
Query: 3668 tttccaagtctaatgaactgtgtactaacagcactgccaaagaaaaagatgagtgtggca 3727
|||| |||||||||||| ||| ||||||||||| | |||| ||||| | || || ||||
Sbjct: 266 tttcgaagtctaatgaaatgtctactaacagcaataccaaggaaaagggtgtgtttggct 325
Query: 3728 tgggtgggttggatgagcacgagcctattgatttgtccaacctggcactacccggaatgg 3787
||||| | |||||| || |||||||||||| | || |||||| || || ||||| |
Sbjct: 326 cgggtgaatcggatgaccatgagcctattgatctctcgaacctgcagcttcctggaatag 385
Query: 3788 atgaccttactgaccaaggtcaggatcttggttcatggttgaatattgatgacgatgcgt 3847
||| ||| || ||||||||| ||| |||||||||||||||||||||||||||||| |
Sbjct: 386 atgtacttgatggccaaggtcaagattttggttcatggttgaatattgatgacgatggat 445
Query: 3848 tacaagatcatgactttatgggccttgagattcccatggatgacctttcagacttgaata 3907
| || ||| |||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 446 tgcatgataatgactgtatgggccttgaaattcccatggatgacctttcagacttgaata 505
Query: 3908 tga 3910
|||
Sbjct: 506 tga 508
>gnl|LJGI|BW624038 similar to UniRef100_A6LBU2 Cluster: Transcription termination factor
Rho; n=1; Parabacteroides distasonis ATCC 8503|Rep:,
partial (2%)
Length = 463
Score = 151 bits (76), Expect = 4e-35
Identities = 232/284 (81%)
Strand = Plus / Plus
Query: 2669 gttcagagttgcaatatgatagcttggatataaatgataagcttctcttggagcttcaaa 2728
|||||| |||| |||| ||| ||||||| | ||||| |||||||||||||||||| |||
Sbjct: 119 gttcagggttggaatacaataccttggatttgaatgaaaagcttctcttggagcttaaaa 178
Query: 2729 gtattggacttgccccagaaccagtgcctgaaatgttgcaagcagacgatgaaggaatat 2788
| |||||| ||||||||||||||| | | || || | | |||| ||||||||||| |
Sbjct: 179 gcattggaattgccccagaaccagattccggaacgtcacgaacagatgatgaaggaattt 238
Query: 2789 tggaggatattactaggttagaggaacttttccaaggacaggtttccaagaagaaaggca 2848
||||||| |||||||||||||| || |||| |||| | | ||||| ||||||||
Sbjct: 239 gtcaggatatcactaggttagaggaggattaccaaaaacagatgtgcaagaggaaaggca 298
Query: 2849 tgctggatggattattgaaatctgcctcaatggaaaaagaacttcaagaaaaggaatttg 2908
|||| |||||||| |||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 299 tgctagatggattggtgaaatctgcctcagtggccaaagaacttcaagaaaaggattttg 358
Query: 2909 atcaacgtgctctagaaaaactcgttttaatggcttatgagaaa 2952
| ||||||||||| || ||||| || |||||||||||||||
Sbjct: 359 aacaacgtgctctggacaaacttcttgagatggcttatgagaaa 402
>gnl|LJGI|GO019794 weakly similar to UniRef100_A7PE35 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 725
Score = 123 bits (62), Expect = 9e-27
Identities = 254/318 (79%)
Strand = Plus / Plus
Query: 2905 tttgatcaacgtgctctagaaaaactcgttttaatggcttatgagaaatacatggcttgt 2964
||||| ||||||||||| || ||||| || ||||||||||||||| ||| || |||
Sbjct: 381 tttgaacaacgtgctctggacaaacttcttgagatggcttatgagaaaaacaagggctgt 440
Query: 2965 tggggtcctagtccctcgggtgggaaaaattcaagcagcagaatggccaagcaagctgct 3024
|| |||| ||| |||| ||| |||| | |||||| |||| ||||||||||||||||
Sbjct: 441 cggcgtccaagttcctcaagtgcaaaaagtgcaagcaacagattggccaagcaagctgcg 500
Query: 3025 ttgggatttgttaaacgtacattggaccggtgccatcaatttgaagatacaggcaagagc 3084
| | ||||||||| ||||||||||| | || | ||||||||||||||||||||||||
Sbjct: 501 cttgaatttgttaagcgtacattggaaagatgtaaacaatttgaagatacaggcaagagc 560
Query: 3085 tgctttagtgagccgttattcaaggatatgttcctgactgcttcctcccagcttagtaac 3144
||||| | ||||| |||||||||||||||||| ||||||| |||||||| ||
Sbjct: 561 tgcttcaacgagcccaaattcaaggatatgttccttgctgcttcttcccagctgagcgct 620
Query: 3145 gttcggctatcagatggaatggagactgaatcctcaaaaccatatgcttctccacttcct 3204
||||||||| || || ||||||||||||||| |||| ||| | |||||||| || ||
Sbjct: 621 gttcggctagttgaaggcatggagactgaatccacaaagccacaagcttctcccttttct 680
Query: 3205 ctggaagcaagaacagtt 3222
|||||||||||||||
Sbjct: 681 tctgaagcaagaacagtt 698
Score = 81.8 bits (41), Expect = 3e-14
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 2835 caagaagaaaggcatgctggatggattattgaaatctgcctcaatggaaaaagaacttca 2894
||||| |||||||||||| |||||||| |||||||||||||| ||| |||||||||||
Sbjct: 206 caagaggaaaggcatgctagatggattggtgaaatctgcctcagtggccaaagaacttca 265
Query: 2895 agaaaaggaattt 2907
||||||| |||||
Sbjct: 266 agaaaagtaattt 278