Miyakogusa Predicted Gene

Lj4g3v2151400.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2151400.1 tr|Q5S3N1|Q5S3N1_SALSA Zonadhesin-like OS=Salmo
salar PE=2 SV=1,31.52,0.061,seg,NULL,CUFF.50601.1
         (361 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65236 similar to UniRef100_Q2A9N2 Cluster: Myb family...   716   0.0  

>gnl|LJGI|TC65236 similar to UniRef100_Q2A9N2 Cluster: Myb family transcription
           factor; n=1; Brassica oleracea|Rep: Myb family
           transcription factor - Brassica oleracea (Wild cabbage),
           partial (5%)
          Length = 704

 Score =  716 bits (361), Expect = 0.0
 Identities = 361/361 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctgatcaatgctgaaagagggaacgccccctctgttgcagttccaaaaccacacctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atgctgatcaatgctgaaagagggaacgccccctctgttgcagttccaaaaccacacctc 601

                                                                       
Query: 61  aaacagcagagcacgacgacacgaacgccagctcaaagaggagaagaggtaaaacaaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaacagcagagcacgacgacacgaacgccagctcaaagaggagaagaggtaaaacaaaca 541

                                                                       
Query: 121 ccatcagaagctagaagagtcccaaggaacccgggtccgcagttgaattctcggatctac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ccatcagaagctagaagagtcccaaggaacccgggtccgcagttgaattctcggatctac 481

                                                                       
Query: 181 agccagcctagaaccactaccaacgaccttagacgacacaccaaaaccccggaactgagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 agccagcctagaaccactaccaacgaccttagacgacacaccaaaaccccggaactgagc 421

                                                                       
Query: 241 atcaaaaatcgaaccgagatacccgctgcaccacacaaaaagccacaccatccatcaacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atcaaaaatcgaaccgagatacccgctgcaccacacaaaaagccacaccatccatcaacc 361

                                                                       
Query: 301 ccgcgagctagaaacaaaggggcactagagatctaccgccgtcaccaacatacagagtga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ccgcgagctagaaacaaaggggcactagagatctaccgccgtcaccaacatacagagtga 301

            
Query: 361 g 361
           |
Sbjct: 300 g 300