Miyakogusa Predicted Gene

Lj4g3v2140220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2140220.1 Non Chatacterized Hit- tr|I1MSI3|I1MSI3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.49,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PC-Esterase,PC-Esterase; PMR5N,PMR5 N-ter,CUFF.50362.1
         (1374 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77590 similar to UniRef100_A7PVY1 Cluster: Chromosome...    62   1e-08
gnl|LJGI|TC80349 similar to UniRef100_A7NWH1 Cluster: Chromosome...    60   4e-08

>gnl|LJGI|TC77590 similar to UniRef100_A7PVY1 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (50%)
          Length = 1549

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 1276 caagactgcagccattggtgccttcctggggtccctgatgcatggaatgag 1326
            ||||||||||| || |||||||||||||| || |||||||| |||||||||
Sbjct: 925  caagactgcagtcactggtgccttcctggtgttcctgatgcgtggaatgag 975


>gnl|LJGI|TC80349 similar to UniRef100_A7NWH1 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (17%)
          Length = 726

 Score = 60.0 bits (30), Expect = 4e-08
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1276 caagactgcagccattggtgccttcctggggtccctgatgcatggaatgagctcatttat 1335
            ||||| ||||||||||||||||| ||||| || || ||| |||||||||||||  |||||
Sbjct: 219  caagattgcagccattggtgcctgcctggtgtaccggatacatggaatgagctgctttat 278

              
Query: 1336 gc 1337
            ||
Sbjct: 279  gc 280