Miyakogusa Predicted Gene
- Lj4g3v2140190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2140190.1 tr|G7JT76|G7JT76_MEDTR Lysine-specific
demethylase NO66 OS=Medicago truncatula GN=MTR_4g126780 PE=4
,75.24,0,SUBFAMILY NOT NAMED,NULL; MINA53 (MYC INDUCED NUCLEAR
ANTIGEN),Lysine-specific demethylase NO66/MYC-,CUFF.50388.1
(2322 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV416064 similar to UniRef100_A7Q6A9 Cluster: Chromosom... 825 0.0
gnl|LJGI|AV766676 similar to UniRef100_A7Q6A9 Cluster: Chromosom... 729 0.0
gnl|LJGI|BP050838 similar to UniRef100_Q8SPI8 Cluster: B cell su... 335 7e-91
gnl|LJGI|FS341795 weakly similar to UniRef100_A7NW67 Cluster: Ch... 66 1e-09
gnl|LJGI|BP035811 58 3e-07
>gnl|LJGI|AV416064 similar to UniRef100_A7Q6A9 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 418
Score = 825 bits (416), Expect = 0.0
Identities = 416/416 (100%)
Strand = Plus / Plus
Query: 847 gtctcgttgccatttgaagttgttcagagaggtctttttgggagtgattttgaagatttt 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtctcgttgccatttgaagttgttcagagaggtctttttgggagtgattttgaagatttt 62
Query: 907 atgtcaaattactgggaagtttcgccttttcttctatcaagggaattaaaggatctaaat 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgtcaaattactgggaagtttcgccttttcttctatcaagggaattaaaggatctaaat 122
Query: 967 atggatgatatgtttagcccatttatacaatctttggggtggaatgggagtgttccttcc 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atggatgatatgtttagcccatttatacaatctttggggtggaatgggagtgttccttcc 182
Query: 1027 cttctttcctcgatactcaaaggtctagtgtcttgttttcctattgcttccgatgagcaa 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cttctttcctcgatactcaaaggtctagtgtcttgttttcctattgcttccgatgagcaa 242
Query: 1087 aacatcctcaattttttgaatgaggtgaaagatagattgggttgtcctttgatctaccag 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aacatcctcaattttttgaatgaggtgaaagatagattgggttgtcctttgatctaccag 302
Query: 1147 caggatatacgggttgtgaaaacagagagccaaacaggaaaagagatgcattactttcag 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caggatatacgggttgtgaaaacagagagccaaacaggaaaagagatgcattactttcag 362
Query: 1207 gactttcatcctggctgcactaaagagcctctgtatttgactgttgatgatgtctt 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gactttcatcctggctgcactaaagagcctctgtatttgactgttgatgatgtctt 418
>gnl|LJGI|AV766676 similar to UniRef100_A7Q6A9 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 544
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 1353 attagcacttatgtttggccaaccttcagtaggtgccaattggtacttaacaccacctaa 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 attagcacttatgtttggccaaccttcagtaggtgccaattggtacttaacaccacctaa 485
Query: 1413 ttctcagggtctggcttgtcactttgatgatcactgtgtacttgtgtgccagattttcgg 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttctcagggtctggcttgtcactttgatgatcactgtgtacttgtgtgccagattttcgg 425
Query: 1473 ttccaagcagtggactgtatttcctcgaaccagtcagctattacctcgtttatatgataa 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttccaagcagtggactgtatttcctcgaaccagtcagctattacctcgtttatatgataa 365
Query: 1533 tctatgtggttctaatattgactgtacgaaatctggtagaagagagttctttctcaggga 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctatgtggttctaatattgactgtacgaaatctggtagaagagagttctttctcaggga 305
Query: 1593 gggtgatgtattatatattcccaggggttttcctcatgaagcatgcacaaactctggtgt 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gggtgatgtattatatattcccaggggttttcctcatgaagcatgcacaaactctggtgt 245
Query: 1653 tggtgatggttcaactcagttttcgttgcaccttacacttagtattgaggttgaacctcc 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tggtgatggttcaactcagttttcgttgcaccttacacttagtattgaggttgaacctcc 185
Query: 1713 ttttgagt 1720
||||||||
Sbjct: 184 ttttgagt 177
>gnl|LJGI|BP050838 similar to UniRef100_Q8SPI8 Cluster: B cell surface marker CD19;
n=1; Sus scrofa|Rep: B cell surface marker CD19 - Sus
scrofa (Pig), partial (4%)
Length = 474
Score = 335 bits (169), Expect = 7e-91
Identities = 178/181 (98%)
Strand = Plus / Plus
Query: 1 atggagaagaatcacgccggcggcggtaagcggaaacggaaaccctcctccggcgaccct 60
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atggagaagaagcatgccggcggcggtaagcggaaacggaaaccctcctccggcgaccct 344
Query: 61 taccttcacgttcaactctccgacgtcaatggcatcttcgctctgctactgtcatccctc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 345 taccttcacgttcaactctccgacgtcaatggcatcttcgctctgctactctcatccctc 404
Query: 121 tccaacctccaccaaccccactctcttcccttcatcaacaaatgcttattcaaactccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tccaacctccaccaaccccactctcttcccttcatcaacaaatgcttattcaaactccac 464
Query: 181 c 181
|
Sbjct: 465 c 465
>gnl|LJGI|FS341795 weakly similar to UniRef100_A7NW67 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 777
Score = 65.9 bits (33), Expect = 1e-09
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1677 gttgcaccttacacttagtattgaggttgaacctccttttgagtg 1721
|||||||||||| || ||||||||||||||||||| |||||||||
Sbjct: 656 gttgcaccttactctaagtattgaggttgaacctctttttgagtg 700
>gnl|LJGI|BP035811
Length = 476
Score = 58.0 bits (29), Expect = 3e-07
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1677 gttgcaccttacacttagtattgaggttgaacctccttttg 1717
|||||||||||| || ||||||||||||||||||| |||||
Sbjct: 451 gttgcaccttactctaagtattgaggttgaacctctttttg 411