Miyakogusa Predicted Gene

Lj4g3v2140140.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2140140.1 tr|Q6YZF6|Q6YZF6_ORYSJ Os08g0535050 protein
OS=Oryza sativa subsp. japonica GN=P0702C09.24 PE=4
SV=1,52.21,4e-18,seg,NULL; coiled-coil,NULL; Use1,Vesicle transport
protein, Use1; SUBFAMILY NOT NAMED,NULL; FAMILY N,CUFF.50355.1
         (717 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP083332 similar to UniRef100_A7Q6A8 Cluster: Chromosom...   517   e-146
gnl|LJGI|TC71020 similar to UniRef100_A7Q6A8 Cluster: Chromosome...   466   e-131

>gnl|LJGI|BP083332 similar to UniRef100_A7Q6A8 Cluster: Chromosome chr11 scaffold_56,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_56, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 481

 Score =  517 bits (261), Expect = e-146
 Identities = 261/261 (100%)
 Strand = Plus / Minus

                                                                       
Query: 457 ttgactgatgagatggtggtgttggcaaaacaactcaaagagagcagtctcatgatgagc 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgactgatgagatggtggtgttggcaaaacaactcaaagagagcagtctcatgatgagc 422

                                                                       
Query: 517 cagtctgtacaaaatactgaaaagattcttgattctacggagaaggccatcgagcatagc 576
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtctgtacaaaatactgaaaagattcttgattctacggagaaggccatcgagcatagc 362

                                                                       
Query: 577 ttggcaagcacaggtcgtgccaatgtgcgagcaacggcaatatactcagagagttccaag 636
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggcaagcacaggtcgtgccaatgtgcgagcaacggcaatatactcagagagttccaag 302

                                                                       
Query: 637 acttcttgcttaacttggcttgtgatgtttgtgatgacttgtgtatttgtcatggttatt 696
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acttcttgcttaacttggcttgtgatgtttgtgatgacttgtgtatttgtcatggttatt 242

                                
Query: 697 ctgctaatccgtgtcacatag 717
           |||||||||||||||||||||
Sbjct: 241 ctgctaatccgtgtcacatag 221


>gnl|LJGI|TC71020 similar to UniRef100_A7Q6A8 Cluster: Chromosome chr11 scaffold_56,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_56, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 518

 Score =  466 bits (235), Expect = e-131
 Identities = 238/239 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtatcagtaaaacagaagtaaatttgaagaggttgcttgcggctgctcctcagcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atgggtatcagtaaaacagaagtaaatttgaagaggttgcttgcggctgctcctcagcag 339

                                                                       
Query: 61  caaaaccaggcaaaacttgtacattatgttgctacgttgcgtgaacagttggaacaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caaaaccaggcaaaacttgtacattatgttgctacgttgcgtgaacagttggaacaattg 399

                                                                       
Query: 121 gctgaagagaagacaccagaaggcttaccaaggatttcaaaggctattttgaatgattat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gctgaagagaagacaccagaaggcttaccaaggatttcaaaggctattttgaatgattat 459

                                                                      
Query: 181 tcagagaagattgaagccattgcttgcaagttggttaacagtgagcctgacatacaagt 239
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcaaagaagattgaagccattgcttgcaagttggttaacagtgagcctgacatacaagt 518