Miyakogusa Predicted Gene
- Lj4g3v2139950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2139950.1 Non Chatacterized Hit- tr|K3XYP6|K3XYP6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si007054,55.17,3e-18,Multidrug resistance efflux transporter
EmrE,NULL; TPT,Domain of unknown function DUF250; UAA,UAA
tr,CUFF.50346.1
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341754 similar to UniRef100_A7Q6A4 Cluster: Chromosom... 1388 0.0
gnl|LJGI|TC67375 similar to UniRef100_A7Q6A4 Cluster: Chromosome... 731 0.0
gnl|LJGI|FS328473 similar to UniRef100_Q2FS23 Cluster: Ppx/GppA ... 90 4e-17
gnl|LJGI|FS354804 90 4e-17
gnl|LJGI|TC82719 90 4e-17
gnl|LJGI|TC66864 88 1e-16
gnl|LJGI|BP055006 86 6e-16
gnl|LJGI|FS345205 similar to UniRef100_Q84WJ4 Cluster: At5g57100... 64 2e-09
gnl|LJGI|FS344545 weakly similar to UniRef100_UPI0000610618 Clus... 56 5e-07
>gnl|LJGI|FS341754 similar to UniRef100_A7Q6A4 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 818
Score = 1388 bits (700), Expect = 0.0
Identities = 700/700 (100%)
Strand = Plus / Plus
Query: 1 atgtttaatttcttaatgagtaaacaggtccgaaagattctcaagcgcaaagacagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgtttaatttcttaatgagtaaacaggtccgaaagattctcaagcgcaaagacagtgat 178
Query: 61 gctggtcaaacaggaaaagcattggaagacttgagaggctctctgttcaatgaatttcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gctggtcaaacaggaaaagcattggaagacttgagaggctctctgttcaatgaatttcgt 238
Query: 121 accgttgaaggtgcaaaacgtcaacaacagcgtacgtgtggtccagctgcagcactttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 accgttgaaggtgcaaaacgtcaacaacagcgtacgtgtggtccagctgcagcactttcc 298
Query: 181 ttcaattttctggttgcagttggtattattttcatgaacaaaatggtgcttcaaactgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttcaattttctggttgcagttggtattattttcatgaacaaaatggtgcttcaaactgtc 358
Query: 241 aaattcaaattcccgatatttctctcactaattcactatgttgtgagctggttcttaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaattcaaattcccgatatttctctcactaattcactatgttgtgagctggttcttaatg 418
Query: 301 gctctactaaatgcattttctttcctccctgcatctccttcctcaaaaactccgctgtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctctactaaatgcattttctttcctccctgcatctccttcctcaaaaactccgctgtct 478
Query: 361 gctttatttactcttggatttgttatgtctctatctactggccttgctaatgtcagcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gctttatttactcttggatttgttatgtctctatctactggccttgctaatgtcagcttg 538
Query: 421 aagtataatagcattggtttctatcagatggcaaagattgcagtaacaccttcaatagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aagtataatagcattggtttctatcagatggcaaagattgcagtaacaccttcaatagtt 598
Query: 481 atggcagaatttgttttgtaccggaagaaagtttcttggccgaaggctattgcattaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 atggcagaatttgttttgtaccggaagaaagtttcttggccgaaggctattgcattaacg 658
Query: 541 gtcgtatctattggtgttgctgtggctacagtgactgacctgcagttccatgtgtttggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gtcgtatctattggtgttgctgtggctacagtgactgacctgcagttccatgtgtttggt 718
Query: 601 gcctttgtagcactggcgtggattgtacctagtgctgctaacaaaatcctctggtcccga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gcctttgtagcactggcgtggattgtacctagtgctgctaacaaaatcctctggtcccga 778
Query: 661 ctgcagcagcaagagaactggacagctttggcgttgatgt 700
||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ctgcagcagcaagagaactggacagctttggcgttgatgt 818
>gnl|LJGI|TC67375 similar to UniRef100_A7Q6A4 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 777
Score = 731 bits (369), Expect = 0.0
Identities = 629/715 (87%), Gaps = 3/715 (0%)
Strand = Plus / Plus
Query: 32 gaaagattctcaagcgcaaagacagtgatgctggtcaaacaggaaaagcattggaagact 91
||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||||||| |
Sbjct: 63 gaaagattctcaagcgcaaagacagtgatgctggtgaaaaaggaagagctttggaagaat 122
Query: 92 tgagaggctctctgttcaatgaatttcgtaccgttgaaggtgcaaaacgtcaacaacagc 151
|||||| |||||| || ||| ||| || || ||||||||| || |||||||||||||
Sbjct: 123 tgagagcctctctctttaatcgattccgatcccctgaaggtgctaagcgtcaacaacagc 182
Query: 152 gtacgtgtggtccagctgcagcactttccttcaattttctggttgcagttggtattattt 211
|||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 183 gtacatgtggtccagctattgcactttccttcaattttctggttgctgttggcattattt 242
Query: 212 tcatgaacaaaatggtgcttcaaactgtcaaattcaaattcccgatatttctctcactaa 271
|||||||||||||||||||||||||| | |||||||||||||| |||||||| || | |
Sbjct: 243 tcatgaacaaaatggtgcttcaaactattaaattcaaattccctatatttcttacattga 302
Query: 272 ttcactatgttgtgagctggttcttaatggctctactaaatgcattttctttcctccctg 331
||||||||| |||||||||||||| |||||| ||||||| |||||||||||||| ||||
Sbjct: 303 ttcactatggagtgagctggttctttatggctgtactaaaagcattttctttccttcctg 362
Query: 332 catctccttcctcaaaa---actccgctgtctgctttatttactcttggatttgttatgt 388
|| |||||||||| ||| |||| |||| |||| ||| ||||||||||||||||||
Sbjct: 363 cacctccttcctcgaaatcaactcgaatgtccactttgttttctcttggatttgttatgt 422
Query: 389 ctctatctactggccttgctaatgtcagcttgaagtataatagcattggtttctatcaga 448
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctctatctactggctttgctaatgtcagcttgaagtataatagcattggtttctatcaga 482
Query: 449 tggcaaagattgcagtaacaccttcaatagttatggcagaatttgttttgtaccggaaga 508
|||||||||||||||| ||||| ||||||||| ||||||||||||| |||||| | ||||
Sbjct: 483 tggcaaagattgcagtgacaccatcaatagttttggcagaatttgtattgtacagtaaga 542
Query: 509 aagtttcttggccgaaggctattgcattaacggtcgtatctattggtgttgctgtggcta 568
||||||||| ||| ||| | | ||||| ||||| |||| |||||||||||| |||||||
Sbjct: 543 aagtttctttgcctaagacattagcattgacggtggtatgtattggtgttgccgtggcta 602
Query: 569 cagtgactgacctgcagttccatgtgtttggtgcctttgtagcactggcgtggattgtac 628
| || ||||| |||||||||||| | |||||||| | ||||||| |||| ||||||||||
Sbjct: 603 ctgtcactgatctgcagttccatttatttggtgcttgtgtagcattggcatggattgtac 662
Query: 629 ctagtgctgctaacaaaatcctctggtcccgactgcagcagcaagagaactggacagctt 688
| ||||||| ||||||||||| ||||| || ||||||||||||||||||||||||| |
Sbjct: 663 caagtgctgtaaacaaaatcctttggtctagattgcagcagcaagagaactggacagcat 722
Query: 689 tggcgttgatgtggaaaacaacacctattactttaattttcctggttgctatgtt 743
|| || |||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 723 tgtcgctgatgtggaaaacaacacctattactttgattttcctggctgctatgtt 777
>gnl|LJGI|FS328473 similar to UniRef100_Q2FS23 Cluster: Ppx/GppA phosphatase; n=1;
Methanospirillum hungatei JF-1|Rep: Ppx/GppA phosphatase
-, partial (2%)
Length = 808
Score = 89.7 bits (45), Expect = 4e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 225 ggtgcttcaaactgtcaaattcaaattcccgatatttctctcactaattcactatgttgt 284
|||| |||||| |||||||||| |||| || ||| |||||||||||| ||||||||||||
Sbjct: 736 ggtgtttcaaattgtcaaattccaatttcctatacttctctcactaaatcactatgttgt 795
Query: 285 gagctggttctta 297
|||||||||||||
Sbjct: 796 gagctggttctta 808
>gnl|LJGI|FS354804
Length = 611
Score = 89.7 bits (45), Expect = 4e-17
Identities = 85/99 (85%), Gaps = 7/99 (7%)
Strand = Plus / Minus
Query: 430 agcattggtttctatcagatggcaaagattgcagtaacaccttcaatagttatg------ 483
||||||||||||||| | ||||||||||| |||||||||| |||||||||||||
Sbjct: 523 agcattggtttctattatatggcaaagatcgcagtaacacgttcaatagttatgcactca 464
Query: 484 -gcagaatttgttttgtaccggaagaaagtttcttggcc 521
|||||||||||| |||| |||||||||||||||||||
Sbjct: 463 tgcagaatttgttctgtataggaagaaagtttcttggcc 425
>gnl|LJGI|TC82719
Length = 781
Score = 89.7 bits (45), Expect = 4e-17
Identities = 85/99 (85%), Gaps = 7/99 (7%)
Strand = Plus / Plus
Query: 430 agcattggtttctatcagatggcaaagattgcagtaacaccttcaatagttatg------ 483
||||||||||||||| | ||||||||||| ||||||||||||||||||||||||
Sbjct: 150 agcattggtttctattatatggcaaagatcgcagtaacaccttcaatagttatgcactca 209
Query: 484 -gcagaatttgttttgtaccggaagaaagtttcttggcc 521
| |||||||||| |||| |||||||||||||||||||
Sbjct: 210 tgtagaatttgttctgtataggaagaaagtttcttggcc 248
Score = 77.8 bits (39), Expect = 1e-13
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 353 cgctgtctgctttatttactcttggatttgttatgtctctatctactggccttgctaatg 412
|||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||
Sbjct: 1 cgctgtctgctttaattacttttggatttgttatgtctctatttactattattgctaatg 60
Query: 413 tcagcttgaagtata 427
|| |||||||||||
Sbjct: 61 tccacttgaagtata 75
>gnl|LJGI|TC66864
Length = 877
Score = 87.7 bits (44), Expect = 1e-16
Identities = 84/98 (85%), Gaps = 7/98 (7%)
Strand = Plus / Plus
Query: 431 gcattggtttctatcagatggcaaagattgcagtaacaccttcaatagttatg------- 483
|||||||||||||| | ||||||||||| |||||||||| |||||||||||||
Sbjct: 274 gcattggtttctattatatggcaaagatcgcagtaacacgttcaatagttatgcactcat 333
Query: 484 gcagaatttgttttgtaccggaagaaagtttcttggcc 521
|||||||||||| |||| |||||||||||||||||||
Sbjct: 334 gcagaatttgttctgtataggaagaaagtttcttggcc 371
>gnl|LJGI|BP055006
Length = 527
Score = 85.7 bits (43), Expect = 6e-16
Identities = 83/97 (85%), Gaps = 7/97 (7%)
Strand = Plus / Minus
Query: 432 cattggtttctatcagatggcaaagattgcagtaacaccttcaatagttatg-------g 484
||||||||||||| | ||||||||||| |||||||||| ||||||||||||| |
Sbjct: 479 cattggtttctattatatggcaaagatcgcagtaacacgttcaatagttatgcactcatg 420
Query: 485 cagaatttgttttgtaccggaagaaagtttcttggcc 521
||||||||||| |||| |||||||||||||||||||
Sbjct: 419 cagaatttgttctgtataggaagaaagtttcttggcc 383
Score = 71.9 bits (36), Expect = 8e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 263 tctcactaattcactatgttgtgagctggttcttaatggctcta 306
||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 527 tctcactaaatcactatgttgtgagctggttcttattggctcta 484
>gnl|LJGI|FS345205 similar to UniRef100_Q84WJ4 Cluster: At5g57100; n=1; Arabidopsis
thaliana|Rep: At5g57100 - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 734
Score = 63.9 bits (32), Expect = 2e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 446 agatggcaaagattgcagtaacaccttcaatagttatggcagaatttgttttgtaccgga 505
||||||||||||||||||| ||||| |||| |||| | ||||||||||| ||||| |||
Sbjct: 430 agatggcaaagattgcagtgacaccctcaacagttttcgcagaatttgtattgtatagga 489
Query: 506 agaa 509
||||
Sbjct: 490 agaa 493
>gnl|LJGI|FS344545 weakly similar to UniRef100_UPI0000610618 Cluster: Transmembrane
protein 63B.; n=2; Gallus gallus|Rep: Transmembrane
protein 63B. - Gallus, partial (2%)
Length = 752
Score = 56.0 bits (28), Expect = 5e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 176 tttccttcaattttctggttgcagttggtattattttcatgaacaaaa 223
|||||||||||||||| ||| | ||||||||||||||||||| ||||
Sbjct: 615 tttccttcaattttctttttgtatttggtattattttcatgaaaaaaa 662