Miyakogusa Predicted Gene

Lj4g3v2139570.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2139570.1 tr|Q0JAK5|Q0JAK5_ORYSJ OSJNBa0009P12.21 protein
OS=Oryza sativa subsp. japonica GN=Os04g0592700 PE=2,37.41,1e-18,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing doma,gene.g56229.t1.1
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61400 similar to UniRef100_A7PB86 Cluster: Chromosome...    58   5e-08

>gnl|LJGI|TC61400 similar to UniRef100_A7PB86 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 829

 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 339 tcatggtgcaattgtttcttgtgttatgttccatccagatccgga 383
           |||||||| | ||||||||||||||||||||||||| || |||||
Sbjct: 527 tcatggtggagttgtttcttgtgttatgttccatccggacccgga 571