Miyakogusa Predicted Gene
- Lj4g3v2139450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2139450.1 Non Chatacterized Hit- tr|C5Y671|C5Y671_SORBI
Putative uncharacterized protein Sb05g005320
OS=Sorghu,48.45,1e-18,UNCHARACTERIZED,NULL,TC61448.path2.1
(600 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61448 weakly similar to UniRef100_A7QUC5 Cluster: Chr... 1166 0.0
gnl|LJGI|TC78542 similar to UniRef100_A7QUC5 Cluster: Chromosome... 287 4e-77
>gnl|LJGI|TC61448 weakly similar to UniRef100_A7QUC5 Cluster: Chromosome chr11
scaffold_177, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_177, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 1655
Score = 1166 bits (588), Expect = 0.0
Identities = 597/600 (99%)
Strand = Plus / Plus
Query: 1 atgacctgtttgggatttttaacacaaatatggcttcaactttgtatcagacaagctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atgacctgtttgggatttttaacacaaatatggcttcaactttgtatcagacaagctaaa 263
Query: 61 aggaaggtgattgatgcattagcgaacctcttttgccggtctaatgtatctgcggcgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggaaggtgattgatgcattagcgaacctcttttgccggtctaatgtatctgcggcgaca 323
Query: 121 ctatgggacggtggttggcttgtacgccagctgtttccttatagcgagtcagaattcaac 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 324 ctatgggacggtggttggcttgtacgccggctgtttccttatagcgagtcagaattcaac 383
Query: 181 agccatcaccttcaattactgaaagtttcttacaagaattgttcttctgctcttgttgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agccatcaccttcaattactgaaagtttcttacaagaattgttcttctgctcttgttgag 443
Query: 241 gaggttaatggtatctggcctgactttcttattcctgttctatgtgatgaatggagaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaggttaatggtatctggcctgactttcttattcctgttctatgtgatgaatggagaaag 503
Query: 301 tgcaaaagagcaatggagtcgtcatctcctcggaaagaaccggattgcatgcttgggcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcaaaagagcaatggagtcgtcatctcctcggaaagaaccggattgcatgcttgggcta 563
Query: 361 caacgaaagttctcttcagaagacagcattccacacaggtcatctttggctgctggagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caacgaaagttctcttcagaagacagcattccacacaggtcatctttggctgctggagaa 623
Query: 421 agaatgcacgagttggtgaaggtatttgtactacaacaccaacttcaattattcactctt 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agaatgctcgagttggtgaaggtatttgtactacaacaccaacttcaattattcactctt 683
Query: 481 ggtagagctttacccgagcaacctccaattaatcctcctggtgatctccctacaaactgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggtagagctttacccgagcaacctccaattaatcctcctggtgatctccctacaaactgt 743
Query: 541 cgtgcccatacttctgggattgccgcgtcaggcccgaaggctggcactgaagtttgcatt 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cgtgctcatacttctgggattgccgcgtcaggcccgaaggctggcactgaagtttgcatt 803
>gnl|LJGI|TC78542 similar to UniRef100_A7QUC5 Cluster: Chromosome chr11 scaffold_177,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_177, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 901
Score = 287 bits (145), Expect = 4e-77
Identities = 400/485 (82%)
Strand = Plus / Plus
Query: 73 gatgcattagcgaacctcttttgccggtctaatgtatctgcggcgacactatgggacggt 132
|||||||||| || ||||||||| || |||||| ||||||| | |||| | ||| | |||
Sbjct: 180 gatgcattagtgagcctcttttgtcgttctaatatatctgctgagacattgtggaatggt 239
Query: 133 ggttggcttgtacgccagctgtttccttatagcgagtcagaattcaacagccatcacctt 192
||||||||| | |||||| || ||||||| || ||| ||||||||||| |||||||| |
Sbjct: 240 ggttggcttttgcgccagttgcttccttacagtgaggcagaattcaaccgccatcacttg 299
Query: 193 caattactgaaagtttcttacaagaattgttcttctgctcttgttgaggaggttaatggt 252
| || ||||||||||| |||||||| | | |||||||||||| |||||||||| |||
Sbjct: 300 gatttgctgaaagtttcatacaagaactctgcttctgctcttgaaaaggaggttaaaggt 359
Query: 253 atctggcctgactttcttattcctgttctatgtgatgaatggagaaagtgcaaaagagca 312
||||||| || |||||||| ||||||| |||||||| |||||||||||||||||||||
Sbjct: 360 ttctggccagatgttcttattactgttctttgtgatgagtggagaaagtgcaaaagagca 419
Query: 313 atggagtcgtcatctcctcggaaagaaccggattgcatgcttgggctacaacgaaagttc 372
|||||||| |||| |||| ||||||||| | ||||| ||| | || | || ||||
Sbjct: 420 atggagtcttcatgccctccaaaagaaccgaagtgcatactttttccacctcaaatgttc 479
Query: 373 tcttcagaagacagcattccacacaggtcatctttggctgctggagaaagaatgcacgag 432
| ||||| ||| || || | | ||||| || ||| |||||||||||||||| |||
Sbjct: 480 ttttcaggagaagatatacctgagggatcatcatttgcttctggagaaagaatgcatgag 539
Query: 433 ttggtgaaggtatttgtactacaacaccaacttcaattattcactcttggtagagcttta 492
|||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 540 ttggtgaaggtatttgtactactacaccaacttcaaatattcactctaggtagagctttg 599
Query: 493 cccgagcaacctccaattaatcctcctggtgatctccctacaaactgtcgtgcccatact 552
|| ||||||||| ||| |||||||||||||||| ||| |||| | ||||||||| |||
Sbjct: 600 cctgagcaaccttatatttatcctcctggtgatcttcctgcaaattctcgtgcccagact 659
Query: 553 tctgg 557
|||||
Sbjct: 660 tctgg 664