Miyakogusa Predicted Gene
- Lj4g3v2137060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2137060.1 tr|G7JUA9|G7JUA9_MEDTR TBC1 domain family member
OS=Medicago truncatula GN=MTR_4g127450 PE=4 SV=1,74.33,0,Domain in
Tre-2, BUB2p, and Cdc16p. Probable,Rab-GTPase-TBC domain; Ypt/Rab-GAP
domain of gyp1p,Rab-,CUFF.50311.1
(2487 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63322 similar to UniRef100_A7QXM9 Cluster: Chromosome... 1213 0.0
gnl|LJGI|FS320113 weakly similar to UniRef100_A7QXM9 Cluster: Ch... 547 e-154
gnl|LJGI|BP057230 similar to UniRef100_A7QXM9 Cluster: Chromosom... 408 e-113
gnl|LJGI|TC71267 similar to UniRef100_A7QXM9 Cluster: Chromosome... 109 8e-23
gnl|LJGI|TC70665 similar to UniRef100_A7QXM9 Cluster: Chromosome... 101 2e-20
gnl|LJGI|BP083815 similar to UniRef100_Q9XHE5 Cluster: Microtubu... 70 7e-11
gnl|LJGI|TC77498 homologue to UniRef100_A9US77 Cluster: Predicte... 66 1e-09
gnl|LJGI|TC81007 homologue to UniRef100_A7QXM9 Cluster: Chromoso... 56 1e-06
>gnl|LJGI|TC63322 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 718
Score = 1213 bits (612), Expect = 0.0
Identities = 624/628 (99%)
Strand = Plus / Plus
Query: 1860 gagaggaaacactagcaatgaggtaaacttatctggctcagctagtccccataatgaggc 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagaggaaacactagcaatgaggtaaacttatctggctcagctagtccccataatgaggc 60
Query: 1920 caacgatcgtgaaaatgactctcagaaaagtagtgttgcttcgaatttatcccttgatga 1979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacgatcgtgaaaatgactctcagaaaagtagtgttgcttcgaatttatcccttgatga 120
Query: 1980 cattaatgaaacttcactttcccttgattcacctcttccaatctctgatcatcctgagaa 2039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cattaatgaaacttcactttcccttgattcacctcttccaatctctgatcatcctgagaa 180
Query: 2040 catatctcagatgtcaggctgcaatgatgattccataggaaatttgatcacacactccaa 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catatctcagatgtcaggctgcaatgatgattccataggaaatttgatcacacactccaa 240
Query: 2100 ggagagaaaactgaataaattccagtggctttggaagtttgggcgcaataatggcgaatt 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggagagaaaactgaataaattccagtggctttggaagtttgggcgcaataatggcgaatt 300
Query: 2160 tattactgagaaaagaggaggtgcttctgaggctgaaaaacctgccaacaattgtaatga 2219
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tattactaagaaaagaggaggtgcttctgaggctgaaaaacctgccaacaattgtaatga 360
Query: 2220 tcaaagtaatagagctccctcttcagctgatgggaattgtagttctagtagttgcaaagg 2279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaaagtaatagagctccctcttcagctgatgggaattgtagttctagtagttgcaaagg 420
Query: 2280 ggaatctgtagaccagaatgtgattgacactttaaggaatcttgggcaatcaatgcttga 2339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaatctgtagaccagaatgtgattgacactttaaggaatcttgggcaatcaatgcttga 480
Query: 2340 acatattcaggtgattgagtcttctttccaacaaggccagggagctttaatggatatcat 2399
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 481 acatattcaggtgattgagtctactttccaacaaggccagggagcttcaatggatatcat 540
Query: 2400 gtctaaaaatgttgtgggtggcaaagggcaggttccagccatatcagctctcaaggaact 2459
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 gtctaaaaatgttgtgggtggcaaagggcaggttgcagccatatcagctctcaaggaact 600
Query: 2460 ccgcaaaattagcaatcttttatctgag 2487
||||||||||||||||||||||||||||
Sbjct: 601 ccgcaaaattagcaatcttttatctgag 628
>gnl|LJGI|FS320113 weakly similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 675
Score = 547 bits (276), Expect = e-154
Identities = 279/280 (99%)
Strand = Plus / Plus
Query: 1 atgccgccggcaatgatgaacccgccattgctcaaaccatcgtcggtaccgcctgtaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atgccgccggcaatgatgaacccgccattgctcaaaccatcgtcggtaccgcctgtaagc 455
Query: 61 tccggcacagtttctcagggttccgagccggagaatcaggaattcggggaccttagaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tccggcacagtttctcagggttccgagccggagaatcaggaattcggggaccttagaggt 515
Query: 121 ttgcagtggcgtataaatcttggggttttgccaccatcatcatcatcatcttcttcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttgcagtggcgtataaatcttggggttttgccaccatcatcatcatcatcttcttcagct 575
Query: 181 tacattgatgatcttcgtcgcgccaccgctaattctcgaaggagatatgccagtttgaga 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tactttgatgatcttcgtcgcgccaccgctaattctcgaaggagatatgccagtttgaga 635
Query: 241 aggcgcctcctggccgatcctcatatttcaaaggatggaa 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aggcgcctcctggccgatcctcatatttcaaaggatggaa 675
>gnl|LJGI|BP057230 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 541
Score = 408 bits (206), Expect = e-113
Identities = 459/544 (84%), Gaps = 6/544 (1%)
Strand = Plus / Minus
Query: 192 tcttcgtcgcgccaccgctaattctcgaaggagatatgccagtttgagaaggcgcctcct 251
||||||||| | ||| ||| ||| | ||||||| ||||| ||||||||||||||||||||
Sbjct: 538 tcttcgtcgggtcactgctgattgtagaaggaggtatgctagtttgagaaggcgcctcct 479
Query: 252 ggccgatcctcatatttcaaaggatggaagtagttcaccttcacccaatcttgtcatgga 311
| || || ||| || ||||||||||| || ||||||| ||| |||| ||||
Sbjct: 478 tgttgaaccacatgttcgaaaggatggaactaattcacct------aatgctgtcgtgga 425
Query: 312 caacccactttcacaaaatcctgatagtacatggagtcgcttttttcgcaacgcagagct 371
||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 424 caatccactttcacaaaatccagatagtacatggagtcgcttttttcgcaatgcagagct 365
Query: 372 ggagaggatggttgatcaggatctatctcgtttatacccagaacatggcaactatttcca 431
|||||| ||||||||||||||| | || || ||||||||||||||||||| ||||||||
Sbjct: 364 ggagagaatggttgatcaggatttgtcacgcttatacccagaacatggcagttatttcca 305
Query: 432 gacaccaggatgccaaggcatattgagacgaattttattactttggtgcgtcaaacaccc 491
|||||| |||||||||||||| |||||||||||||||||||| ||||| ||| |||||
Sbjct: 304 gacaccgggatgccaaggcatgttgagacgaattttattactatggtgtctcaggcaccc 245
Query: 492 agagtgtggttatagacaaggaatgcatgaattacttgccccggtgctttacgttctcca 551
||| ||||||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 244 agaatgtggttatagacaaggaatgcatgaattacttgctcctctgctttatgttctcca 185
Query: 552 agttgatattgagcgtctttcagaagttcgaaagacttatgaagattacttcactgatat 611
||||||| | |||||||||||||||||||| ||| |||||||||| | ||||| || |
Sbjct: 184 agttgatttggagcgtctttcagaagttcggaagctttatgaagatcaattcacagacag 125
Query: 612 atttgatggtctcttttgtcaagagaatgatctttcttacagatttgatttcagaaaatc 671
||||||||| || | || ||||||||||||||| ||||||| || ||||| | ||||
Sbjct: 124 atttgatggccttctatgccaagagaatgatcttgcttacagtttcgattttatgaaata 65
Query: 672 ttcagagttgacggaggatgaaattggctccaatgaaaatgcaatgaaaatcaagagtct 731
| |||| | ||| |||||||||||||| || ||||||||||||| ||| |||||
Sbjct: 64 tccagaccaggtagagaatgaaattggctcctgtggaaatgcaatgaaagtcantagtct 5
Query: 732 tgat 735
||||
Sbjct: 4 tgat 1
>gnl|LJGI|TC71267 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 945
Score = 109 bits (55), Expect = 8e-23
Identities = 168/206 (81%), Gaps = 6/206 (2%)
Strand = Plus / Plus
Query: 2281 gaatctgtagaccagaatgtgattgacactttaaggaatcttgggcaatcaatgcttgaa 2340
|||||||| |||||||||||||| | ||||| | |||||||||||| || ||||||||
Sbjct: 526 gaatctgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgcttgac 585
Query: 2341 catattcaggtgattgagtcttctttccaacaa------ggccagggagctttaatggat 2394
||||||||||||||||| ||| |||||||||| || |||||||| | ||||||
Sbjct: 586 catattcaggtgattgaatctgttttccaacaagaccggggacagggagcctcaatggag 645
Query: 2395 atcatgtctaaaaatgttgtgggtggcaaagggcaggttccagccatatcagctctcaag 2454
| | | ||||| |||||| | | ||||||||| |||||| | ||| | |||||||||||
Sbjct: 646 aacttatctaagaatgttcttgttggcaaaggccaggttactgccgtgacagctctcaag 705
Query: 2455 gaactccgcaaaattagcaatctttt 2480
|| || || |||||||||||||||||
Sbjct: 706 gagcttcggaaaattagcaatctttt 731
Score = 73.8 bits (37), Expect = 5e-12
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 2101 gagagaaaactgaataaattccagtggctttggaagtttgggcgcaataatggcgaattt 2160
|||||||||| ||| ||||||||||||||||||||||||| || ||||||| || ||
Sbjct: 337 gagagaaaaccaaatcaattccagtggctttggaagtttggacggaataatgctgacgtt 396
Query: 2161 attactgagaaaagaggaggtgcttctgaggct 2193
|| |||||||| |||||||||| ||||||||
Sbjct: 397 atctctgagaaagtaggaggtgctgctgaggct 429
>gnl|LJGI|TC70665 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(11%)
Length = 586
Score = 101 bits (51), Expect = 2e-20
Identities = 167/206 (81%), Gaps = 6/206 (2%)
Strand = Plus / Plus
Query: 2281 gaatctgtagaccagaatgtgattgacactttaaggaatcttgggcaatcaatgcttgaa 2340
|||||||| |||||||||||||| | ||||| | |||||||||||| || ||||||||
Sbjct: 176 gaatctgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgcttgac 235
Query: 2341 catattcaggtgattgagtcttctttccaacaa------ggccagggagctttaatggat 2394
||||||||||||||||| ||| |||||||||| || |||||||| | ||||||
Sbjct: 236 catattcaggtgattgaatctgttttccaacaagaccggggacagggagcctcaatggag 295
Query: 2395 atcatgtctaaaaatgttgtgggtggcaaagggcaggttccagccatatcagctctcaag 2454
| | | ||||| |||||| | | |||| |||| |||||| | ||| | |||||||||||
Sbjct: 296 aacttatctaagaatgttcttgttggccaaggccaggttactgccgtgacagctctcaag 355
Query: 2455 gaactccgcaaaattagcaatctttt 2480
|| || || |||||||||||||||||
Sbjct: 356 gagcttcggaaaattagcaatctttt 381
>gnl|LJGI|BP083815 similar to UniRef100_Q9XHE5 Cluster: Microtubule-associated protein;
n=4; Arabidopsis thaliana|Rep: Microtubule-associated
protein - Arabidopsis thaliana (Mouse-ear cress), partial
(3%)
Length = 333
Score = 69.9 bits (35), Expect = 7e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2281 gaatctgtagaccagaatgtgattgacactttaaggaatcttgggcaatcaatgcttgaa 2340
|||||||| |||||||||||||| | ||||| | |||||||||||| || ||||||||
Sbjct: 268 gaatctgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgcttgac 209
Query: 2341 catattcaggt 2351
|||||||||||
Sbjct: 208 catattcaggt 198
>gnl|LJGI|TC77498 homologue to UniRef100_A9US77 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (9%)
Length = 567
Score = 65.9 bits (33), Expect = 1e-09
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 87 gccggagaatcaggaattcggggaccttagagg-tttgcagtggcgtataaatcttgggg 145
||||||||||| | |||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 447 gccggagaatcggcgattcggtgatcttagaggctttgcagtggcgtataaatcttgggg 506
Query: 146 t 146
|
Sbjct: 507 t 507
>gnl|LJGI|TC81007 homologue to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 329
Score = 56.0 bits (28), Expect = 1e-06
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 2401 tctaaaaatgttgtgggtggcaaagggcaggttccagccatatcagctctcaaggaactc 2460
||||| |||||| | | ||||||||| |||||| | ||| | ||||||||||||| ||
Sbjct: 5 tctaagaatgttcttgttggcaaaggccaggttactgccgtgacagctctcaaggagctt 64
Query: 2461 cgcaaaattagcaatctttt 2480
|| |||||||||||||||||
Sbjct: 65 cggaaaattagcaatctttt 84