Miyakogusa Predicted Gene
- Lj4g3v2121760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2121760.1 Non Chatacterized Hit- tr|B9FGB9|B9FGB9_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,36.72,6e-18,UNCHARACTERIZED,Protein of unknown function DUF821,
CAP10-like; KDEL (LYS-ASP-GLU-LEU) CONTAINING - ,gene.g56190.t1.1
(1221 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78353 weakly similar to UniRef100_Q2HRE8 Cluster: Lip... 1080 0.0
gnl|LJGI|FS330901 similar to UniRef100_Q9SH28 Cluster: F2K11.20;... 70 4e-11
gnl|LJGI|FS357087 similar to UniRef100_A7PZA5 Cluster: Chromosom... 56 5e-07
>gnl|LJGI|TC78353 weakly similar to UniRef100_Q2HRE8 Cluster:
Lipopolysaccharide-modifying protein; n=1; Medicago
truncatula|Rep: Lipopolysaccharide-modifying protein -
Medicago truncatula (Barrel medic), partial (51%)
Length = 807
Score = 1080 bits (545), Expect = 0.0
Identities = 554/557 (99%)
Strand = Plus / Plus
Query: 665 ggtacaagatttatgcagaaggggccacatggtctgtgagtgaaaagtacataatagcat 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggtacaagatttatgcagaaggggccacatggtctgtgagtgaaaagtacataatagcat 224
Query: 725 gtgactccatgactatgttcatagagcctaggttttatgacttctttacaagaagcatgg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gtgactccatgactatgttcatagagcctaggttttatgacttctttacaagaagcatgg 284
Query: 785 tacccttattgcactactggcccgtcagcgccaaaaacatgtgtgaagagattaagtttg 844
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 285 tacccttattgcactactggcctgtcagcgccaaaaacatgtgtgaagagattaagtttg 344
Query: 845 ctgtggattggggcaatgctcaccttgacagtgcagaggctattggcaaaggaggaactg 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgtggattggggcaatgctcaccttgacagtgcagaggctattggcaaaggaggaactg 404
Query: 905 actacatcattgagaatttaaagatgaagtttgtgtatgattacatgtttcacctgctaa 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 actacatcattgagaatttaaagatgaagtttgtgtatgattacatgtttcacctgctaa 464
Query: 965 ataactatgcaaagctcttgaaattcaaaccaacaatacctgcagaagctgttgaggttt 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ataactatgcaaagctcttgaaattcaaaccaacaatacctgcagaagctgttgaggttt 524
Query: 1025 gttctgaaagtatggcctgttccctgcgcggggcaaggaagcattttatggtggagtcta 1084
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 525 gttctgaaagtatggcctgtcccctgcgcggggcaaggaagcattttatggtggagttta 584
Query: 1085 tggtgaattcaccaagtgatacacctccatgtacagtgcctcctccctatacagctgaaa 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tggtgaattcaccaagtgatacacctccatgtacagtgcctcctccctatacagctgaaa 644
Query: 1145 aactccatgaggttctacaggaaaaagagaatcgaatccagcaagtgaagacgaggactg 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aactccatgaggttctacaggaaaaagagaatcgaatccagcaagtgaagacgaggactg 704
Query: 1205 tgaataaagagcaataa 1221
|||||||||||||||||
Sbjct: 705 tgaataaagagcaataa 721
>gnl|LJGI|FS330901 similar to UniRef100_Q9SH28 Cluster: F2K11.20; n=1; Arabidopsis
thaliana|Rep: F2K11.20 - Arabidopsis thaliana (Mouse-ear
cress), partial (19%)
Length = 765
Score = 69.9 bits (35), Expect = 4e-11
Identities = 187/237 (78%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 295 tacttcagatggatccatgaagatcttaaaccatgg---gagagtgcaggaatcacaagg 351
|||||||||||||||||||||||||| ||||||||| |||| | ||| |||||||||
Sbjct: 390 tacttcagatggatccatgaagatctaaaaccatggaaagagaaaggagggatcacaagg 449
Query: 352 gacatggtggaaagagccaaaaacatctcacatttcaggcttgtggttgtgaatggaaaa 411
| ||| ||||| | | | || | |||| |||||||||||| ||||| |||| |||
Sbjct: 450 cagatgttggaaggtgtaagaaggacagcacacttcaggcttgtgattgtggatgggaaa 509
Query: 412 gcttatgtggaaaagtattccaaatcctttcagacaagggatgtgttcacaatatggggg 471
| |||||||| |||| | | || |||||||||| |||||||| ||| | |||||
Sbjct: 510 gtgtatgtggagaagtttagacagtctattcagacaagagatgtgtttacattgtgggga 569
Query: 472 attttgcagcttctaaggctatacccaggaaagataccagatttggagctaatgttt 528
|||||||||||||| || | ||||| |||||| | || ||||||||||| ||||||
Sbjct: 570 attttgcagcttctgagagtgtaccctggaaagttgcctgatttggagctcatgttt 626
>gnl|LJGI|FS357087 similar to UniRef100_A7PZA5 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 658
Score = 56.0 bits (28), Expect = 5e-07
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 946 tacatgtttcacctgctaaataactatgcaaagctcttgaaattcaaaccaacaatacct 1005
||||||||||| || || ||| | |||||||||||||| || ||||||||||| | |||
Sbjct: 397 tacatgtttcatctactgaatgaatatgcaaagctcttaaagttcaaaccaactgtccct 338
Query: 1006 gcagaagctgttgaggtttgttctgaaa 1033
||| |||||| ||| ||||| ||||||
Sbjct: 337 ccaggagctgtggagttttgtcctgaaa 310