Miyakogusa Predicted Gene
- Lj4g3v2120640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2120640.1 tr|B9HP49|B9HP49_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1088155 PE=4
SV=1,35.23,3e-18,VHP,Villin headpiece; HP,Villin headpiece; VILLIN
1-4,NULL; VILLIN,Gelsolin; VHP, Villin headpiece d,CUFF.50287.1
(567 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69507 homologue to UniRef100_A2Q391 Cluster: Villin h... 170 6e-42
>gnl|LJGI|TC69507 homologue to UniRef100_A2Q391 Cluster: Villin headpiece; Gelsolin
region; n=1; Medicago truncatula|Rep: Villin headpiece;
Gelsolin region - Medicago truncatula (Barrel medic),
partial (21%)
Length = 1102
Score = 170 bits (86), Expect = 6e-42
Identities = 441/556 (79%), Gaps = 5/556 (0%)
Strand = Plus / Plus
Query: 1 atgtctgttagtcctgatcgtgttcgtgtgagaggaagatctccagcttttaatgcactg 60
|||||||||||||||||||||||||||||||| || || |||||||| || |||||| |
Sbjct: 59 atgtctgttagtcctgatcgtgttcgtgtgaggggtaggtctccagccttcaatgcatta 118
Query: 61 gcagctaatttcgagaacacaaatgctaggaacctttcaactccacctccaattattagg 120
||||||||||| ||||| | |||||||||||||||||||||||||||| | | ||
Sbjct: 119 gcagctaattttgagaatcccggtgctaggaacctttcaactccacctccagtagtcaga 178
Query: 121 aaattgtacccaaaatctatgagtccagatacagcaaaattgggacctaagtcttcagcc 180
|| |||| |||||||||| || || ||| | |||| | ||| ||| || ||| |||||
Sbjct: 179 aagctgtatccaaaatctaagacacctgattctgcaatactggcaccaaaatctgcagcc 238
Query: 181 atagctagca-ttagttctacttttg---aaccaccttcagcacgagaaaaattgattcc 236
|||||| ||| ||| |||| |||||| ||||||||||||||||||||| |||| ||
Sbjct: 239 atagct-gcacttacttcttcttttgaacaaccaccttcagcacgagaaactatgatacc 297
Query: 237 tcggtcacttaaagcgagttcaggtgcctccaaatcagacccggagataagtgaaaagga 296
||||||| |||||| |||| ||| || |||||||| |||| || | || ||| |||||
Sbjct: 298 tcggtcagttaaagtgagtccagtcacccccaaatcaaaccctgataaaaatgacaagga 357
Query: 297 tgattctatgagcagcacaacagaatctcctaatgtacagggagatgtgaaagagggtga 356
||||| ||||||| || |||| || || ||| ||||||||| ||||||||
Sbjct: 358 gaattctgcgagcagccgtgtggagtctcttaccatagaggaagatgtgaaggagggtga 417
Query: 357 agctgaagatgatgaaggtctcccagtttacccatatgaaagtgttaacacagattctac 416
||| ||||| || ||||||||| | || |||| |||||| || |||| | |||| |
Sbjct: 418 agcagaagacgaggaaggtctctcctttcacccgtatgaacgtcttaaagtatcttctcc 477
Query: 417 agatcctgcaacagacattgacgtcactaaacgagaggcttatctgtcacctgaggagtt 476
|||||||| | ||| |||||| || |||||||| ||| ||||||| ||| ||| ||||||
Sbjct: 478 agatcctgtaccaggcattgatgtgactaaacgggagacttatctatcatctgcggagtt 537
Query: 477 tcaaaagcacttagggatgactaagaaagaatttaacaaattgccaaaatggaaacagaa 536
|| || | || |||||| | ||| | | |||| |||| ||||| ||||||||||||||
Sbjct: 538 caaagagaaatttgggatgtccaaggatgcattttacaagttgcccaaatggaaacagaa 597
Query: 537 caaactcaaaatggct 552
||||||||||||||||
Sbjct: 598 caaactcaaaatggct 613