Miyakogusa Predicted Gene
- Lj4g3v2120450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2120450.1 tr|I1LZI3|I1LZI3_SOYBN Lysyl-tRNA synthetase
OS=Glycine max GN=Gma.23033 PE=3 SV=1,89.83,0,coiled-coil,NULL;
tRNA-synt_2,Aminoacyl-tRNA synthetase, class II (D/K/N);
tRNA_anti,Nucleic acid bi,CUFF.50271.1
(1797 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59705 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA... 1011 0.0
gnl|LJGI|TC60737 homologue to UniRef100_Q6F2U9 Cluster: Lysyl-tR... 924 0.0
gnl|LJGI|TC64537 homologue to UniRef100_A2Q1N3 Cluster: Lysyl-tR... 682 0.0
gnl|LJGI|TC59429 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA... 337 1e-91
>gnl|LJGI|TC59705 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II;
n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II -
Medicago truncatula (Barrel medic), partial (34%)
Length = 775
Score = 1011 bits (510), Expect = 0.0
Identities = 552/572 (96%)
Strand = Plus / Plus
Query: 137 ctgctgaactgcaacgtgctcaatctaacaaacctgcttctgccgatgacgatgatatgg 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctgctgaactgcaacgtgctcaatctaacaaacctgcttctgccgatgacgatgatatgg 263
Query: 197 acccaacgcaataccatgagaacaggcttaagtatcttgctgcccacaaggcagaaggga 256
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 acccaacgcaataccatgagaacaggcttaagtatcttgctgcccacaaggcggaaggga 323
Query: 257 ataacccgtacccgcacaaattcgcggtctctatgtccattgagcaatacatcagcaaat 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataacccgtacccgcacaaattcgcggtctctatgtccattgagcaatacatcagcaaat 383
Query: 317 atgaagggttgagcgatggggagcacgttgaagatgtctctgtgtctttggctggccgaa 376
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atggagggttgagcgatggggagcacgttgaagatgtctctgtgtctttggctggccgaa 443
Query: 377 ttatgcacaaacgtacttcgggtgcaaagcttgtcttttatgatcttcatggtggtggcc 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatgcacaaacgtacttcgggtgcaaagcttgtcttttatgatcttcatggtggtggcc 503
Query: 437 tcaaggttcaggttatggctgatgcaagtaaatctgatttgggtgaggttgagttttcca 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcaaggttcaggttatggctgatgcaagtaaatctgatttgggtgaggttgagttttcca 563
Query: 497 aattccattctaatgtgaagcgtggggatattgttggtatcactggatttccagggaaaa 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aattccattctaatgtgaagcgtggggatattgttggtatcactggatttccagggaaaa 623
Query: 557 gtaagaaaggggagcttagtattttccccaagacttttgtagtgctgtctcattgtttac 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtaagaaaggggagcttagtattttccccaagacttttgtagtgctgtctcattgtttac 683
Query: 617 atatgatgccaagggcaaagtnnnnnnnnnnnnnnnnnnataatgcaaatttgaagaaaa 676
||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 684 atatgatgccaagggcaaagtctgctgctgctgctgctgataatgcaaatttgaagaaaa 743
Query: 677 gcgcatggatcccaggaagtaccaggaatcct 708
||||||||||||||||||||||||||||||||
Sbjct: 744 gcgcatggatcccaggaagtaccaggaatcct 775
Score = 153 bits (77), Expect = 5e-36
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 atggaacctccctcatcggagcctgcagcttccggcgccggcgaaaacctcagcaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggaacctccctcatcggagcctgcagcttccggcgccggcgaaaacctcagcaaaaat 127
Query: 61 gcattgaagcgggaact 77
|||||||||||||||||
Sbjct: 128 gcattgaagcgggaact 144
>gnl|LJGI|TC60737 homologue to UniRef100_Q6F2U9 Cluster: Lysyl-tRNA synthetase; n=2;
Oryza sativa Japonica Group|Rep: Lysyl-tRNA synthetase -
Oryza sativa subsp. japonica (Rice), partial (25%)
Length = 933
Score = 924 bits (466), Expect = 0.0
Identities = 466/466 (100%)
Strand = Plus / Plus
Query: 1332 gaatgcttgcttgaagtatgacatcaaatgccctccccctgaaacaaccactcgcttgct 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatgcttgcttgaagtatgacatcaaatgccctccccctgaaacaaccactcgcttgct 60
Query: 1392 ggataaacttgtagggcactttttggaagaaacgtgtgtgaatcctacattcatcataaa 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggataaacttgtagggcactttttggaagaaacgtgtgtgaatcctacattcatcataaa 120
Query: 1452 ccatcctgagataatgagtcctttggcgaagtggcacagatcaaaaccaggcttgacaga 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatcctgagataatgagtcctttggcgaagtggcacagatcaaaaccaggcttgacaga 180
Query: 1512 acgctttgaattgtttgttaataagcatgaactttgcaatgcatacactgaattgaatga 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgctttgaattgtttgttaataagcatgaactttgcaatgcatacactgaattgaatga 240
Query: 1572 ccctgtagtacaacgtcagagatttgctgaacaactcaaggatcggcaatcaggcgatga 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccctgtagtacaacgtcagagatttgctgaacaactcaaggatcggcaatcaggcgatga 300
Query: 1632 tgaagcaatggccttagacgaaacattttgtacagctctagagtatggtctgccaccaac 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaagcaatggccttagacgaaacattttgtacagctctagagtatggtctgccaccaac 360
Query: 1692 tgggggttggggtttgggtattgatcggctgacgatgatactgactgattctcagaatat 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgggggttggggtttgggtattgatcggctgacgatgatactgactgattctcagaatat 420
Query: 1752 taaggaagtacttctcttccctgccatgaaacctcaagattgatcc 1797
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaggaagtacttctcttccctgccatgaaacctcaagattgatcc 466
>gnl|LJGI|TC64537 homologue to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II;
n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II -
Medicago truncatula (Barrel medic), partial (33%)
Length = 910
Score = 682 bits (344), Expect = 0.0
Identities = 553/620 (89%), Gaps = 2/620 (0%)
Strand = Plus / Plus
Query: 1175 aaatcaagtatcatgcagaggggattgataaggatcctattgaaatagacttcactccac 1234
||||||||||||||||||| |||||||||||||||| ||||||||| || || |||||||
Sbjct: 22 aaatcaagtatcatgcagatgggattgataaggatc-tattgaaatcgattttactccac 80
Query: 1235 ccttcagaaggattgatatgattgaggaactagagaaaatggcaggcctcagtattccca 1294
|||||||||||||| ||||||| || ||||||| ||||||||||||| ||||||||
Sbjct: 81 t-ttcagaaggattgacgtgattgaagatttagagaagatggcaggcctcaatattccca 139
Query: 1295 aggacttgtctagtgaggaaactaatcaatatctgaagaatgcttgcttgaagtatgaca 1354
| |||||||| ||||||||| |||| |||||||||| | |||||||||||||| |||| |
Sbjct: 140 aagacttgtcaagtgaggaagctaaccaatatctgagggatgcttgcttgaagcatgaga 199
Query: 1355 tcaaatgccctccccctgaaacaaccactcgcttgctggataaacttgtagggcactttt 1414
||||||||||||| || |||||||| |||| ||| ||||||||||||| ||||||||||
Sbjct: 200 tcaaatgccctcctcccgaaacaactgctcgtttgttggataaacttgtggggcactttt 259
Query: 1415 tggaagaaacgtgtgtgaatcctacattcatcataaaccatcctgagataatgagtcctt 1474
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 tgggagaaacgtgtgtgaatcctacattcatcataaaccatcctgagataatgagtccat 319
Query: 1475 tggcgaagtggcacagatcaaaaccaggcttgacagaacgctttgaattgtttgttaata 1534
|||| |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 320 tggcaaagtggcacagatcaaaaccaggccagactgaacgttttgaattgtttgttaata 379
Query: 1535 agcatgaactttgcaatgcatacactgaattgaatgaccctgtagtacaacgtcagagat 1594
| |||||| ||||||||||||| || |||||||| |||||||| || ||||| |||||||
Sbjct: 380 aacatgaagtttgcaatgcatatacggaattgaacgaccctgtggtgcaacgacagagat 439
Query: 1595 ttgctgaacaactcaaggatcggcaatcaggcgatgatgaagcaatggccttagacgaaa 1654
||||||||||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 440 ttgctgaacaactaaaggaccggcaatcaggtgatgatgaggcaatggccttagatgaaa 499
Query: 1655 cattttgtacagctctagagtatggtctgccaccaactgggggttggggtttgggtattg 1714
|||||||||| ||| | ||||||||| |||||||||| | |||||||||||||||||||
Sbjct: 500 cattttgtactgctttggagtatggtttgccaccaacagctggttggggtttgggtattg 559
Query: 1715 atcggctgacgatgatactgactgattctcagaatattaaggaagtacttctcttccctg 1774
|| || |||| |||||| | |||||||| |||||||||||||| || || || |||||||
Sbjct: 560 ataggttgaccatgatattcactgattcacagaatattaaggaggttctacttttccctg 619
Query: 1775 ccatgaaacctcaagattga 1794
||||||| ||||||||||||
Sbjct: 620 ccatgaagcctcaagattga 639
>gnl|LJGI|TC59429 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II;
n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II -
Medicago truncatula (Barrel medic), partial (35%)
Length = 816
Score = 337 bits (170), Expect = 1e-91
Identities = 377/446 (84%)
Strand = Plus / Plus
Query: 181 gatgacgatgatatggacccaacgcaataccatgagaacaggcttaagtatcttgctgcc 240
||||| |||||||||||||||||||||||| |||||| ||| | ||||||||||| |
Sbjct: 303 gatgaagatgatatggacccaacgcaatactttgagaataggataaagtatcttgcaggt 362
Query: 241 cacaaggcagaagggaataacccgtacccgcacaaattcgcggtctctatgtccattgag 300
|| || | |||||||||||||||||| |||||||| ||| ||| ||||||| |||
Sbjct: 363 cagaaaggagaagggaataacccgtatccgcacaagttctttgtcactatgtctgttgct 422
Query: 301 caatacatcagcaaatatgaagggttgagcgatggggagcacgttgaagatgtctctgtg 360
||||||| | | |||||||| || ||| ||||| | ||| |||| || |||||||||
Sbjct: 423 gaatacattaaggagtatgaaggtttaagcaatgggcaacaccttgaggacgtctctgtg 482
Query: 361 tctttggctggccgaattatgcacaaacgtacttcgggtgcaaagcttgtcttttatgat 420
||||||||||||||||| |||||||| || | || ||||||||||||||||||||||||
Sbjct: 483 tctttggctggccgaatcatgcacaagcgcgcatctggtgcaaagcttgtcttttatgat 542
Query: 421 cttcatggtggtggcctcaaggttcaggttatggctgatgcaagtaaatctgatttgggt 480
|| || |||||||| ||||||||||||||||||| |||||||||||||| || ||| |
Sbjct: 543 ctgcacggtggtggtttcaaggttcaggttatggccgatgcaagtaaatcggacttgaat 602
Query: 481 gaggttgagttttccaaattccattctaatgtgaagcgtggggatattgttggtatcact 540
|| | |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 603 gaagctgagttttccaagttccattctaatgtgaagcgtggtgacattgttggcatcact 662
Query: 541 ggatttccagggaaaagtaagaaaggggagcttagtattttccccaagacttttgtagtg 600
|| |||||||| ||||| ||||| || ||||||||||| ||||| ||||||||||| ||
Sbjct: 663 gggtttccaggcaaaagcaagaagggagagcttagtatattccctaagacttttgtggta 722
Query: 601 ctgtctcattgtttacatatgatgcc 626
|||||||| ||| | |||||||||||
Sbjct: 723 ctgtctcactgtctgcatatgatgcc 748