Miyakogusa Predicted Gene
- Lj4g3v2120440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2120440.1 tr|Q647J9|Q647J9_MEDSA Homogentisate
phytylprenyltransferase OS=Medicago sativa GN=Hpt1 PE=2
SV=1,79.37,0,BACTERIOCHLOROPHYLL SYNTHASE,NULL;
PRENYLTRANSFERASES,NULL; seg,NULL; UbiA,UbiA prenyltransferase
fa,CUFF.50266.1
(1251 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60258 similar to UniRef100_Q1ACB4 Cluster: Homogentis... 1255 0.0
gnl|LJGI|TC67513 similar to UniRef100_Q647J9 Cluster: Homogentis... 1193 0.0
gnl|LJGI|TC66702 weakly similar to UniRef100_Q58FG4 Cluster: Hom... 151 1e-35
gnl|LJGI|TC81439 weakly similar to UniRef100_Q647J9 Cluster: Hom... 143 3e-33
gnl|LJGI|TC65990 weakly similar to UniRef100_Q1ACB4 Cluster: Hom... 141 1e-32
gnl|LJGI|TC65535 weakly similar to UniRef100_Q647J9 Cluster: Hom... 115 7e-25
gnl|LJGI|GO010175 similar to UniRef100_Q647J9 Cluster: Homogenti... 113 3e-24
gnl|LJGI|FS339451 weakly similar to UniRef100_Q58FG4 Cluster: Ho... 94 3e-18
gnl|LJGI|BP044894 94 3e-18
gnl|LJGI|TC77972 weakly similar to UniRef100_Q1ACB4 Cluster: Hom... 90 4e-17
>gnl|LJGI|TC60258 similar to UniRef100_Q1ACB4 Cluster: Homogentisate
phytyltransferase VTE2-1; n=1; Glycine max|Rep:
Homogentisate phytyltransferase VTE2-1 - Glycine max
(Soybean), partial (42%)
Length = 776
Score = 1255 bits (633), Expect = 0.0
Identities = 636/637 (99%)
Strand = Plus / Plus
Query: 1 atgccattgcccctcaacactgaatacatagccatggattctatgcttgttggatcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgccattgcccctcaacactgaatacatagccatggattctatgcttgttggatcttca 199
Query: 61 accaccactgtggtaggtggaaatcgctggcagaccaaaaattgcatcaacaatcacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 accaccactgtggtaggtggaaatcgctggcagaccaaaaattgcatcaacaatcacact 259
Query: 121 gcaagttctaatgcaccaagagcttcttggctcaaatggaatattccaaaagaatacaac 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaaagttctaatgcaccaagagcttcttggctcaaatggaatattccaaaagaatacaac 319
Query: 181 cttttgaggctccggcggctgagtctgaaccatcagtccaaaggcattggaggagggtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttttgaggctccggcggctgagtctgaaccatcagtccaaaggcattggaggagggtct 379
Query: 241 atgtatcaagaatgcaataggaaatatgttgtgaaagcagcccctggaaaatcttttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgtatcaagaatgcaataggaaatatgttgtgaaagcagcccctggaaaatcttttgaa 439
Query: 301 tctgaacctgatgctttagatcccaaagatgttttgggcagtgtcaaaaattccttggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctgaacctgatgctttagatcccaaagatgttttgggcagtgtcaaaaattccttggat 499
Query: 361 gctttctacaggttttctaggccacacacagttattggcacagcattgagcataatttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctttctacaggttttctaggccacacacagttattggcacagcattgagcataatttct 559
Query: 421 gtgtctctccttgcagtggagagattatcagatgtatctccactattttttactggtctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgtctctccttgcagtggagagattatcagatgtatctccactattttttactggtctg 619
Query: 481 ttagaggctgtggtagctgccctgtttatgaatatctacattgttggtctgaatcaattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttagaggctgtggtagctgccctgtttatgaatatctacattgttggtctgaatcaattg 679
Query: 541 tctgatgttgaaatagacaagataaacaagccatatcttccattggcatctggggaatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tctgatgttgaaatagacaagataaacaagccatatcttccattggcatctggggaatat 739
Query: 601 tcctttaacactggtgtcattattgttgcatcttttt 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 740 tcctttaacactggtgtcattattgttgcatcttttt 776
>gnl|LJGI|TC67513 similar to UniRef100_Q647J9 Cluster: Homogentisate
phytylprenyltransferase; n=1; Medicago sativa|Rep:
Homogentisate phytylprenyltransferase - Medicago sativa
(Alfalfa), partial (49%)
Length = 888
Score = 1193 bits (602), Expect = 0.0
Identities = 608/610 (99%)
Strand = Plus / Plus
Query: 642 tctgagtttttggcttggctgggttgttggttcatggccattgttctgggctcttttcat 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgagtttttggcttggctgggttgttggttcatggccattgttctgggctcttttcat 60
Query: 702 cagttttatgctaggaactgcttattcaatcgatgttccctggttgagatggaaaagatt 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagttttatgctaggaactgcttattcaatcgatgttccctggttgagatggaaaagatt 120
Query: 762 tgcagtggttgcggcaatgtgcattctggctgttcgggcagttatagttcaacttgcatt 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcagtggttgcggcaatgtgcattctggctgttcgggcagttatagttcaacttgcatt 180
Query: 822 tttccttcacatgcagacatttgtattcaagagaccggctctcttttcaagaccactgat 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttccttcacatgcagacatttgtattcaagagaccggctctcttttcaagaccactgat 240
Query: 882 ttttgctactgcattcatgagcttcttctctgtagttatagcattgttcaaggatatacc 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttgctactgcattcatgagcttcttctctgtagttatagcattgttcaaggatatacc 300
Query: 942 tgacatagatggtgataaaatatttggcatccaatctttttcagtacgtttaggtcagaa 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacatagatggtgataaaatatttggcatccaatctttttcagtacgtttaggtcagaa 360
Query: 1002 gcgggtattctggatttgtgttgcccttcttgaaatggcttatggagtcgccctcgtggt 1061
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 gcgggtattctggatttgtgttgcccttcttgaaatggcttatggggtcgccctcgtggt 420
Query: 1062 gggagcagcatctccttgcctatggagtaaaatcgtcacgggtttgggacacgctgttct 1121
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggagtagcatctccttgcctatggagtaaaatcgtcacgggtttgggacacgctgttct 480
Query: 1122 tgctgcaattctcttttatcgtgccaaatctgtagatttgagaagtaaagcttccatcac 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctgcaattctcttttatcgtgccaaatctgtagatttgagaagtaaagcttccatcac 540
Query: 1182 atccttctacatgtttatctggaagctattttacgcagagtacttgctcatacctttggt 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atccttctacatgtttatctggaagctattttacgcagagtacttgctcatacctttggt 600
Query: 1242 tagatgagga 1251
||||||||||
Sbjct: 601 tagatgagga 610
>gnl|LJGI|TC66702 weakly similar to UniRef100_Q58FG4 Cluster: Homogentisate
phytylprenyltransferase; n=1; Glycine max|Rep:
Homogentisate phytylprenyltransferase - Glycine max
(Soybean), partial (90%)
Length = 1506
Score = 151 bits (76), Expect = 1e-35
Identities = 175/208 (84%)
Strand = Plus / Plus
Query: 444 attatcagatgtatctccactattttttactggtctgttagaggctgtggtagctgccct 503
|||||||||| |||||||| ||||||||||||| ||||| || || || || |||
Sbjct: 474 attatcagatatatctccattattttttactggcttgttacagataatgatacctttcct 533
Query: 504 gtttatgaatatctacattgttggtctgaatcaattgtctgatgttgaaatagacaagat 563
|||||| ||||||| |||| |||| | |||||||||| |||||||||||||||||||||
Sbjct: 534 atttatggatatctatattgctggtattaatcaattgtttgatgttgaaatagacaagat 593
Query: 564 aaacaagccatatcttccattggcatctggggaatattcctttaacactggtgtcattat 623
||||||||||||||||||||| ||||||||| ||| ||| ||| | |||||||||||
Sbjct: 594 aaacaagccatatcttccattagcatctgggaaattatccattacaagcggtgtcattat 653
Query: 624 tgttgcatctttttcaattctgagtttt 651
||||||||||| || ||| ||||||||
Sbjct: 654 tgttgcatcttgtttaataatgagtttt 681
Score = 121 bits (61), Expect = 1e-26
Identities = 343/437 (78%)
Strand = Plus / Plus
Query: 815 ttgcatttttccttcacatgcagacatttgtattcaagagaccggctctcttttcaagac 874
||||||||||| ||||||| ||||| ||||| |||||||| || ||| | ||| | |||
Sbjct: 845 ttgcatttttctttcacatacagacttttgttttcaagaggccagctatgtttccgagat 904
Query: 875 cactgatttttgctactgcattcatgagcttcttctctgtagttatagcattgttcaagg 934
|| ||| ||||| | | ||||||||||| | ||| ||| ||||||||||||||||
Sbjct: 905 cattgaattttgtaatggtgttcatgagcttgtactcgataggaatagcattgttcaagg 964
Query: 935 atatacctgacatagatggtgataaaatatttggcatccaatctttttcagtacgtttag 994
| |||||||||| || || ||||||| | ||| ||| | ||||| || |||||| |
Sbjct: 965 acttacctgacattgaaggagataaaaaacatggaatctcaacttttgcaacacgttttg 1024
Query: 995 gtcagaagcgggtattctggatttgtgttgcccttcttgaaatggcttatggagtcgccc 1054
|||| || | |||||| ||| |||||||| ||||| ||||||| |||| ||| |||| |
Sbjct: 1025 gtcaaaaaccggtattttggttttgtgtttccctttttgaaatagcttttggtatcgctc 1084
Query: 1055 tcgtggtgggagcagcatctccttgcctatggagtaaaatcgtcacgggtttgggacacg 1114
| | |||||||||| |||| ||| | | ||||||||||| ||||||||| ||||| | |
Sbjct: 1085 ttggggtgggagcaacatcatctttcatgtggagtaaaattgtcacgggtatgggaaatg 1144
Query: 1115 ctgttcttgctgcaattctcttttatcgtgccaaatctgtagatttgagaagtaaagctt 1174
|||||| ||| || |||| | | ||| |||||||||||||||| ||| |||||||
Sbjct: 1145 ttgttctggcttcagttctttggcacaatgcaaaatctgtagatttgaaaagcaaagctt 1204
Query: 1175 ccatcacatccttctacatgtttatctggaagctattttacgcagagtacttgctcatac 1234
|| | |||||||||||||| || ||||||||| || | ||||||||| | || || |
Sbjct: 1205 ccttgtcatccttctacatgcttgcctggaagctcttatttgcagagtaccttcttatgc 1264
Query: 1235 ctttggttagatgagga 1251
|||| ||||||||||||
Sbjct: 1265 ctttagttagatgagga 1281
>gnl|LJGI|TC81439 weakly similar to UniRef100_Q647J9 Cluster: Homogentisate
phytylprenyltransferase; n=1; Medicago sativa|Rep:
Homogentisate phytylprenyltransferase - Medicago sativa
(Alfalfa), partial (70%)
Length = 1349
Score = 143 bits (72), Expect = 3e-33
Identities = 174/208 (83%)
Strand = Plus / Plus
Query: 444 attatcagatgtatctccactattttttactggtctgttagaggctgtggtagctgccct 503
|||||||||| |||||||| ||||||||||||| ||||| || || || || |||
Sbjct: 474 attatcagatatatctccattattttttactggcttgttacagataatgatacctttcct 533
Query: 504 gtttatgaatatctacattgttggtctgaatcaattgtctgatgttgaaatagacaagat 563
|||||| ||||||| |||| |||| | |||||||||| |||||||||||||||||||||
Sbjct: 534 atttatggatatctatattgctggtattaatcaattgtttgatgttgaaatagacaagat 593
Query: 564 aaacaagccatatcttccattggcatctggggaatattcctttaacactggtgtcattat 623
||||||||||||||| ||||| ||||||||| ||| ||| ||| | |||||||||||
Sbjct: 594 aaacaagccatatctcccattagcatctgggaaattatccattacaagcggtgtcattat 653
Query: 624 tgttgcatctttttcaattctgagtttt 651
||||||||||| || ||| ||||||||
Sbjct: 654 tgttgcatcttgtttaataatgagtttt 681
>gnl|LJGI|TC65990 weakly similar to UniRef100_Q1ACB4 Cluster: Homogentisate
phytyltransferase VTE2-1; n=1; Glycine max|Rep:
Homogentisate phytyltransferase VTE2-1 - Glycine max
(Soybean), partial (36%)
Length = 776
Score = 141 bits (71), Expect = 1e-32
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 525 tggtctgaatcaattgtctgatgttgaaatagacaagataaacaagccatatcttccatt 584
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tggtgtgaatcaattgtttgatgttgaaatagacaagataaacaagccatatcttccatt 606
Query: 585 ggcatctggggaatattcctttaacactggtgtcattattgttgcat 631
||||||||| |||| || | || ||||||||||||||||||||||
Sbjct: 607 ggcatctggagaattatcatatacaactggtgtcattattgttgcat 653
>gnl|LJGI|TC65535 weakly similar to UniRef100_Q647J9 Cluster: Homogentisate
phytylprenyltransferase; n=1; Medicago sativa|Rep:
Homogentisate phytylprenyltransferase - Medicago sativa
(Alfalfa), partial (67%)
Length = 1462
Score = 115 bits (58), Expect = 7e-25
Identities = 334/426 (78%)
Strand = Plus / Plus
Query: 826 cttcacatgcagacatttgtattcaagagaccggctctcttttcaagaccactgattttt 885
||||| |||||||| ||||| |||||||| || || ||||| | ||| || ||| ||||
Sbjct: 881 cttcatatgcagacttttgtgttcaagaggccacctgtctttcctagatcattgactttt 940
Query: 886 gctactgcattcatgagcttcttctctgtagttatagcattgttcaaggatatacctgac 945
| ||| | ||||||||| || | |||| | | |||||||||||| ||||||||||||||
Sbjct: 941 gttacagtattcatgagtttatactctatgggtatagcattgttgaaggatatacctgat 1000
Query: 946 atagatggtgataaaatatttggcatccaatctttttcagtacgtttaggtcagaagcgg 1005
| || || ||||||| |||||| ||| | |||||| ||| |||||| ||| | || ||
Sbjct: 1001 gttgaaggagataaaaaatttgggatctattcttttccagcacgttttggtaaaaaacga 1060
Query: 1006 gtattctggatttgtgttgcccttcttgaaatggcttatggagtcgccctcgtggtggga 1065
|| || ||||||| |||| ||||| ||||| |||||| ||| |||| ||| ||||||||
Sbjct: 1061 gtgttttggatttctgtttccctttttgaattggcttttggtatcgctctcatggtggga 1120
Query: 1066 gcagcatctccttgcctatggagtaaaatcgtcacgggtttgggacacgctgttcttgct 1125
||| |||| ||| | | ||||||||| | |||| || ||||||| | ||||||||||
Sbjct: 1121 gcaacatcatcttacatgtggagtaaagttgtcatggttttgggaaatattgttcttgct 1180
Query: 1126 gcaattctcttttatcgtgccaaatctgtagatttgagaagtaaagcttccatcacatcc 1185
|| || ||| | ||||| ||| |||| ||||| ||| ||||||||||| ||||
Sbjct: 1181 tcagttgtctggcaccgtgctaaaaatgtaaatttgggaaacaaagcttccatggcatca 1240
Query: 1186 ttctacatgtttatctggaagctattttacgcagagtacttgctcatacctttggttaga 1245
||||||||| | || |||||| |||| | ||||| |||| ||||||| ||||| | ||||
Sbjct: 1241 ttctacatgctcatatggaagatattattcgcagcgtacatgctcatgcctttagctaga 1300
Query: 1246 tgagga 1251
| ||||
Sbjct: 1301 taagga 1306
Score = 85.7 bits (43), Expect = 6e-16
Identities = 215/271 (79%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 415 atttctgtgtctctccttgcagtggagagattatcagatgtatctccactattttttact 474
||||||| |||||||| |||||||||| |||||||||| | |||||||||||||| | |
Sbjct: 469 atttctgcatctctcctcgcagtggagacattatcagatatctctccactatttttcatt 528
Query: 475 ggtctgttagaggctgtggtagctgccctgtttatgaatatct-acattgttggtctgaa 533
||| | || ||| | |||| ||| ||| |||||| ||| | | ||| ||| ||||
Sbjct: 529 ggtgtattccaggttatggtggctcacctatttatgggtattttatgttggtggcgtgaa 588
Query: 534 tcaattgtctgatgttgaaatagacaagataaacaagccatatcttccattggcatctgg 593
|||||| | |||| ||| |||||| ||| ||||||| |||||||||||||||||||| ||
Sbjct: 589 tcaattatttgatattggaatagataaggtaaacaaaccatatcttccattggcatccgg 648
Query: 594 ggaatattcctttaacactggtgtcattattgttgcatctttttcaattctgagtttttg 653
| ||| | |||| ||||||||||||||||| ||| || || | || |||| ||||
Sbjct: 649 gaaattgccatttacaactggtgtcattattgtcacatgttgtttacttttgagcttttc 708
Query: 654 gcttggctgggttgttggttcatggccattg 684
|||||||||| | | ||||| |||||||||
Sbjct: 709 gcttggctggatgttcggttcttggccattg 739
>gnl|LJGI|GO010175 similar to UniRef100_Q647J9 Cluster: Homogentisate
phytylprenyltransferase; n=1; Medicago sativa|Rep:
Homogentisate phytylprenyltransferase - Medicago sativa
(Alfalfa), partial (15%)
Length = 677
Score = 113 bits (57), Expect = 3e-24
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 525 tggtctgaatcaattgtctgatgttgaaatagacaagataaacaagccatatcttccatt 584
|||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 588 tggtgtgaatcaattgtttgatgttgaaataggcaagataaacaagccatatcttccatt 647
Query: 585 ggcatctgg 593
|||||||||
Sbjct: 648 ggcatctgg 656
>gnl|LJGI|FS339451 weakly similar to UniRef100_Q58FG4 Cluster: Homogentisate
phytylprenyltransferase; n=1; Glycine max|Rep:
Homogentisate phytylprenyltransferase - Glycine max
(Soybean), partial (44%)
Length = 784
Score = 93.7 bits (47), Expect = 3e-18
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 532 aatcaattgtctgatgttgaaatagacaagataaacaagccatatcttccattggcatct 591
|||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 591 aatcaattgtatgatattgaaatagataagataaacaagccacatcttccattggcatct 650
Query: 592 ggg 594
|||
Sbjct: 651 ggg 653
>gnl|LJGI|BP044894
Length = 522
Score = 93.7 bits (47), Expect = 3e-18
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 1205 agctattttacgcagagtacttgctcatacctttggttagatgagga 1251
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agctattttacgcagagtacttgctcatacctttggttagatgagga 343
>gnl|LJGI|TC77972 weakly similar to UniRef100_Q1ACB4 Cluster: Homogentisate
phytyltransferase VTE2-1; n=1; Glycine max|Rep:
Homogentisate phytyltransferase VTE2-1 - Glycine max
(Soybean), partial (28%)
Length = 615
Score = 89.7 bits (45), Expect = 4e-17
Identities = 264/337 (78%)
Strand = Plus / Plus
Query: 912 tgtagttatagcattgttcaaggatatacctgacatagatggtgataaaatatttggcat 971
||||| |||| |||||| |||||||||||||||||| || || |||||| |||||| ||
Sbjct: 11 tgtaggtatatcattgtgcaaggatatacctgacatggagggagataaagcatttggtat 70
Query: 972 ccaatctttttcagtacgtttaggtcagaagcgggtattctggatttgtgttgcccttct 1031
| | ||||||||| |||||| ||| || | || ||||||| || ||||| | ||| |
Sbjct: 71 caattctttttcaacacgtttcggtacaaaacaggcattctggcttagtgttacactttt 130
Query: 1032 tgaaatggcttatggagtcgccctcgtggtgggagcagcatctccttgcctatggagtaa 1091
||||||||| |||||||||||| | || |||| ||||| | | | ||||||||
Sbjct: 131 caaaatggcttttggagtcgccctatttacggcagcaacatcttcctatttgtggagtaa 190
Query: 1092 aatcgtcacgggtttgggacacgctgttcttgctgcaattctcttttatcgtgccaaatc 1151
| | | |||||| ||||| | |||||||| ||| ||||||||| || |||||||||
Sbjct: 191 agttataacgggtctgggatatgctgttctggcttcaattctctggtacaatgccaaatc 250
Query: 1152 tgtagatttgagaagtaaagcttccatcacatccttctacatgtttatctggaagctatt 1211
|||||||||| ||||||||| ||| | ||||||||| || ||||||||||||||| |
Sbjct: 251 tgtagatttgggaagtaaagattcggtacaatccttctatatatttatctggaagctact 310
Query: 1212 ttacgcagagtacttgctcatacctttggttagatga 1248
|| ||| | ||||| ||| | ||||| |||||||||
Sbjct: 311 ttcggcacattacttcctcgtgccttttgttagatga 347