Miyakogusa Predicted Gene
- Lj4g3v2120410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2120410.1 tr|G7JUE1|G7JUE1_MEDTR WD repeat-containing
protein OS=Medicago truncatula GN=MTR_4g127820 PE=4
SV=1,74.41,0,seg,NULL; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; TRANSDUCIN
FAMI,CUFF.50264.1
(2406 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS334902 similar to UniRef100_A7Q8C3 Cluster: Chromosom... 1550 0.0
gnl|LJGI|TC65820 weakly similar to UniRef100_UPI0000196B9F Clust... 1267 0.0
gnl|LJGI|TC63711 similar to UniRef100_A7Q8C3 Cluster: Chromosome... 404 e-111
>gnl|LJGI|FS334902 similar to UniRef100_A7Q8C3 Cluster: Chromosome chr14 scaffold_63,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_63, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 798
Score = 1550 bits (782), Expect = 0.0
Identities = 794/798 (99%)
Strand = Plus / Plus
Query: 1148 gtttagtggctgtacaaacagagaactatggcatccaattctacagcttgtttggagatc 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttagtggctgtacaaacagagaactatggcatccaattctacagcttgtttggagatc 60
Query: 1208 gtggactctatgaggttcaagtctgtgaaagaaaccatcaaccagttgatgaggtcacgg 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggactctatgaggttcaagtctgtgaaagaaaccatcaaccagttgatgaggtcacgg 120
Query: 1268 tggtagtgcccgtagtggagctgtctgttggtggttctataatgtgtactgtagaagtta 1327
|||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 121 tggtagtgaccgtagtggagctgtctgttgatggttctataatgggtactgtagaagtta 180
Query: 1328 agcttcctgaagaaggaataggaggtcttatttgcttgaaattttgggatttagattcag 1387
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctacctgaagaaggaataggaggtcttatttgcttgaaattttgggatttagattcag 240
Query: 1388 atagcaaaagattttcagtatctacccttatttatgaacctcacagggatgctcatattt 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagcaaaagattttcagtatctacccttatttatgaacctcacagggatgctcatattt 300
Query: 1448 cttctgttgctttccatccaacctgtcatatggctgtcagctcatcttatggtggagatt 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttctgttgctttccatccaacctgtcatatggctgtcagctcatcttatggtggagatt 360
Query: 1508 tcaagatatgggtctgcaaggaagaaagtcagcagaaaggcaagatgcttcagacttcta 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaagatatgggtctgcaaggaagaaagtcagcagaaaggcaagatgcttcagacttcta 420
Query: 1568 gttggatgtgccacgctgttgggtcatataaaaataaagcaatgagagctgctgcttttt 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttggatgtgccacgctgttgggtcatataaaaataaagcaatgagagctgctgcttttt 480
Query: 1628 ccgctgatggttctgtgctggcagttgcagcagacactgttattacattgtgggaccctg 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgctgatggttctgtgctggcagttgcagcagacactgttattacattgtgggaccctg 540
Query: 1688 ataagaatgtgctcattgctgttgtaggagagactccaacgcctattgatcggctcaact 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataagaatgtgctcattgctgttgtaggagagactccaacgcctattgatcggctcaact 600
Query: 1748 ttgctggaaagtcagagtatcttctttctgtatctcatggttcaaatccacagctgtctg 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgctggaaagtcagagtatcttctttctgtatctcatggttcaaatccacagctgtctg 660
Query: 1808 tttggagtttgtcaaagttatctgcatcttggtcatacagtcttcaagtagaagctgtct 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttggagtttgtcaaagttatctgcatcttggtcatacagtcttcaagtagaagctgtct 720
Query: 1868 cctgttcaatggacttatcattttttgccgtccttgctctcctccccaagtcaaacgaac 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cctgttcaatggacttatcattttttgccgtccttgctctcctccccaagtcaaacgaac 780
Query: 1928 gtacatttagaagtgatg 1945
||||||||||||||||||
Sbjct: 781 gtacatttagaagtgatg 798
>gnl|LJGI|TC65820 weakly similar to UniRef100_UPI0000196B9F Cluster: transducin
family protein / WD-40 repeat family protein; n=1;
Arabidopsis thaliana|Rep: transducin family protein /
WD-40 repeat family protein - Arabidopsis thaliana,
partial (20%)
Length = 689
Score = 1267 bits (639), Expect = 0.0
Identities = 645/647 (99%)
Strand = Plus / Plus
Query: 1 atgaagggaggtcaaacctacgtctcgtctcctccttccttctccaacgacggcaagcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atgaagggaggtcaaacctacgtctcgtctcctccttccttctccaacgacggcaagcgc 102
Query: 61 ctcctcgtttgcagcggctgctccgtcgccgtcttcagcactgccaccgccttgcaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctcctcgtttgcagcggctgctccgtcgccgtcttcagcactgccaccgccttgcaggtt 162
Query: 121 tccgctttggaaggccacaccgccgccgtcacctccatcgtcgtcgtccctgctcccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tccgctttggaaggccacaccgccgccgtcacctccatcgtcgtcgtccctgctcccaac 222
Query: 181 agcgttctaagctactgctggacctcttctctcgacggaaccattcgctactgggacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 agcgttctaagctactgctggacctcttctctcgacggaaccattcgctactgggacttc 282
Query: 241 ttcctctctgaatgcatcaaaacacttgaccttggctttcctatttactccatggtgata 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 283 ttcctctctgaatgcatcaaaacacttgaccttggcttccctatttactccatggtgata 342
Query: 301 cctgcaatattatccccaccagaagaaaacaatgcaaggcagcctaatgtttttgcctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cctgcaatattatccccaccagaagaaaacaatgcaaggcagcctaatgtttttgcctat 402
Query: 361 gtgtctgttcaagatgagaatgcccaagataaccggcccaaacctcgtcgtggacagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtgtctgttcaagatgagaatgcccaagataaccggcccaaacctcgtcgtggacagatc 462
Query: 421 aggaagtgtaacttgacaaactatcatgctatcagcaaccatatcttgaaagagactgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aggaagtgtaacttgacaaactatcatgctatcagcaaccatatcttgaaagagactgaa 522
Query: 481 cggccagaatctttgaccatttgtccatctgggaaatttttgggaataaaagacaagcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cggccagaatctttgaccatttgtccatctgggaaatttttgggaataaaagacaagcgc 582
Query: 541 aaacttcatatatggaaaatccctaaaatggattctgattctgctgtgttgaagaagatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 583 aaacttcatatatggaaaatccctaaaatggattctgattctgctgtgttgaaaaagatt 642
Query: 601 accctgcatcatacaaagacctttacagctcttgcatttcatccaac 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 accctgcatcatacaaagacctttacagctcttgcatttcatccaac 689
>gnl|LJGI|TC63711 similar to UniRef100_A7Q8C3 Cluster: Chromosome chr14 scaffold_63,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_63, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 747
Score = 404 bits (204), Expect = e-111
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 2203 caaattggatatacatcaatttatggggagttacccgcattcgatttcaaaaggaacaag 2262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaattggatatacatcaatttatggggagttacccgcattcgatttcaaaaggaacaag 60
Query: 2263 gcttcatcggttttctctggtgcatcagagaggccttgggaaaccatatttagtggatca 2322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttcatcggttttctctggtgcatcagagaggccttgggaaaccatatttagtggatca 120
Query: 2323 tcacatatgttgccaccccttaccaaattgtgttcagaatttttggagtccctgctagag 2382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcacatatgttgccaccccttaccaaattgtgttcagaatttttggagtccctgctagag 180
Query: 2383 aaaaggaccacgacggtagaatga 2406
||||||||||||||||||||||||
Sbjct: 181 aaaaggaccacgacggtagaatga 204