Miyakogusa Predicted Gene

Lj4g3v2120380.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2120380.1 tr|F2CQT6|F2CQT6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,81.82,1e-18,seg,NULL;
DUF1777,Domain of unknown function DUF1777,CUFF.50255.1
         (556 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV419050 similar to UniRef100_A7Q6D6 Cluster: Chromosom...   652   0.0  

>gnl|LJGI|AV419050 similar to UniRef100_A7Q6D6 Cluster: Chromosome chr11 scaffold_56,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_56, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 409

 Score =  652 bits (329), Expect = 0.0
 Identities = 329/329 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaccgatcgagaccgcgacagagacagagaacgaagacgcgagaaggaggagcgcgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   atgaccgatcgagaccgcgacagagacagagaacgaagacgcgagaaggaggagcgcgac 63

                                                                       
Query: 61  cgtggtgacagagaccgtgaccgtgaccgaacacggagcaagagatcccgttcgcgttcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  cgtggtgacagagaccgtgaccgtgaccgaacacggagcaagagatcccgttcgcgttcg 123

                                                                       
Query: 121 cgttcaatcgaccatggccgctcccgccacgcgcgctctcgctctccttccgagcgctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cgttcaatcgaccatggccgctcccgccacgcgcgctctcgctctccttccgagcgctcc 183

                                                                       
Query: 181 caccgccgccgtcaccaccggacgccttcccctgaccaacccaggaagcgtcaccggcga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 caccgccgccgtcaccaccggacgccttcccctgaccaacccaggaagcgtcaccggcga 243

                                                                       
Query: 241 gattccgtggaggacgaccacaaggacacgaagaaagtggtgtcggacttcgtcgacggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gattccgtggaggacgaccacaaggacacgaagaaagtggtgtcggacttcgtcgacggg 303

                                        
Query: 301 atagtgaaggagcagcagcagaagcacaa 329
           |||||||||||||||||||||||||||||
Sbjct: 304 atagtgaaggagcagcagcagaagcacaa 332