Miyakogusa Predicted Gene
- Lj4g3v2093730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2093730.1 Non Chatacterized Hit- tr|C5XQN4|C5XQN4_SORBI
Putative uncharacterized protein Sb03g040990
OS=Sorghu,80.22,0,Yip1,Yip1 domain; seg,NULL; YIP1-RELATED,NULL; GOLGI
MEMBRANE PROTEIN YIP1,NULL,CUFF.50240.1
(834 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57798 homologue to UniRef100_A7Q6F3 Cluster: Chromoso... 1065 0.0
gnl|LJGI|DC594900 homologue to UniRef100_A7Q6F3 Cluster: Chromos... 367 e-101
gnl|LJGI|TC73547 homologue to UniRef100_A7Q6F3 Cluster: Chromoso... 98 1e-19
gnl|LJGI|AV767772 similar to UniRef100_Q7RFI2 Cluster: Drosophil... 54 1e-06
>gnl|LJGI|TC57798 homologue to UniRef100_A7Q6F3 Cluster: Chromosome chr11
scaffold_56, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_56, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (84%)
Length = 1159
Score = 1065 bits (537), Expect = 0.0
Identities = 537/537 (100%)
Strand = Plus / Plus
Query: 298 aataccctcaccgagccagtttgggacaccgtcaagcgcgatctctccaggatcgtcagc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aataccctcaccgagccagtttgggacaccgtcaagcgcgatctctccaggatcgtcagc 466
Query: 358 aatctcaagctcgttgtgtttcccaacccttaccgtgaggatcctggtaaggctctccgc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aatctcaagctcgttgtgtttcccaacccttaccgtgaggatcctggtaaggctctccgc 526
Query: 418 gattgggatctctgggggccgttcttcttcattgtcttccttggccttatcctttcttgg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gattgggatctctgggggccgttcttcttcattgtcttccttggccttatcctttcttgg 586
Query: 478 tctgcatctgtcaaaaagtctgaggtttttgctgttgcatttgcattacttgctgctggt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tctgcatctgtcaaaaagtctgaggtttttgctgttgcatttgcattacttgctgctggt 646
Query: 538 gctgtaattttgacattgaatgtactgcttctgggtgggcacattattttcttccagagt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gctgtaattttgacattgaatgtactgcttctgggtgggcacattattttcttccagagt 706
Query: 598 ttgagtctgctgggttattgcttattccctctggatgttggggcattaatttgtatgttg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ttgagtctgctgggttattgcttattccctctggatgttggggcattaatttgtatgttg 766
Query: 658 aaggacaatgtcatactcaaagtggttgtggtatgtgtaacattggcttggagctcttgg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 aaggacaatgtcatactcaaagtggttgtggtatgtgtaacattggcttggagctcttgg 826
Query: 718 gctgcatatcctttcatgagttctgcagtcaaccccaggagaaaagctcttgcactctac 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gctgcatatcctttcatgagttctgcagtcaaccccaggagaaaagctcttgcactctac 886
Query: 778 cctgtttttctcatgtatgtatctgttggttttctcatcattgccattgactaaatg 834
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 cctgtttttctcatgtatgtatctgttggttttctcatcattgccattgactaaatg 943
Score = 347 bits (175), Expect = 7e-95
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 1 atgtcacacggcgataccataccccttcacccatcttcccaatccgacatcgacgagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgtcacacggcgataccataccccttcacccatcttcccaatccgacatcgacgagatc 169
Query: 61 gagaatctcatctacgcatctccggccaccgtcctccccgccagaccacccagtcctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gagaatctcatctacgcatctccggccaccgtcctccccgccagaccacccagtcctcca 229
Query: 121 cgcgcctccatccccgtcaccacctcttctcccttcatcaattccaacctccctg 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 cgcgcctccatccccgtcaccacctcttctcccttcatcaattccaacctccctg 284
>gnl|LJGI|DC594900 homologue to UniRef100_A7Q6F3 Cluster: Chromosome chr11
scaffold_56, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_56, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 506
Score = 367 bits (185), Expect = e-101
Identities = 188/189 (99%)
Strand = Plus / Plus
Query: 298 aataccctcaccgagccagtttgggacaccgtcaagcgcgatctctccaggatcgtcagc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aataccctcaccgagccagtttgggacaccgtcaagcgcgatctctccaggatcgtcagc 377
Query: 358 aatctcaagctcgttgtgtttcccaacccttaccgtgaggatcctggtaaggctctccgc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatctcaagctcgttgtgtttcccaacccttaccgtgaggatcctggtaaggctctccgc 437
Query: 418 gattgggatctctgggggccgttcttcttcattgtcttccttggccttatcctttcttgg 477
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 438 gattgggatctctgggggccgttcttcttcattgtcttccctggccttatcctttcttgg 497
Query: 478 tctgcatct 486
|||||||||
Sbjct: 498 tctgcatct 506
Score = 283 bits (143), Expect = 9e-76
Identities = 168/175 (96%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 1 atgtcacacggcgataccataccccttcacccatcttcccaatccgacatcgacgagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atgtcacacggcgataccataccccttcacccatcttcccaatccgacatcgacgagatc 81
Query: 61 gagaatctcatctacgcatctccggccaccgtcctccccgccagaccacccagtcctcca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 82 gagaatctcatctacgcatctccggccaccgtcctccccgccagaccacccagt-cgggg 140
Query: 121 cgcgcctccatccccgtcaccacctcttctcccttcatcaattccaacctccctg 175
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ggcgcctccatccccatcaccacctcttctcccttcatcaattccaacctccctg 195
>gnl|LJGI|TC73547 homologue to UniRef100_A7Q6F3 Cluster: Chromosome chr11
scaffold_56, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_56, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 733
Score = 97.6 bits (49), Expect = 1e-19
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 365 agctcgttgtgtttcccaacccttaccgtgaggatcctggtaaggctctccgcgattggg 424
||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 438 agctcgtcgtgttccccaacccttaccgtgaggatcccggtaaggctcttcgcgattggg 497
Query: 425 atctc 429
|||||
Sbjct: 498 atctc 502
Score = 93.7 bits (47), Expect = 2e-18
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 87 caccgtcctccccgccagaccacccagtcctccacgcgcctccatccccgtcaccacctc 146
|||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||
Sbjct: 228 caccgtcctccccgccagaccacctagccc-ccacgcgcctccatccccgtcacctcctc 286
Query: 147 ttctccc 153
|||||||
Sbjct: 287 ttctccc 293
>gnl|LJGI|AV767772 similar to UniRef100_Q7RFI2 Cluster: Drosophila melanogaster
BcDNA.GH02833; n=1; Plasmodium yoelii yoelii|Rep:
Drosophila, partial (1%)
Length = 460
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 125 cctccatccccgtcaccacctcttctcccttcatcaattccaa 167
||||||||||||||||||||| || | |||| |||||||||||
Sbjct: 291 cctccatccccgtcaccacctttttttccttaatcaattccaa 333