Miyakogusa Predicted Gene
- Lj4g3v2034050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2034050.1 Non Chatacterized Hit- tr|I1LVV2|I1LVV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10917
PE,79.33,0,ATP-DEPENDENT CLP PROTEASE-RELATED,NULL; ATP-DEPENDENT CLP
PROTEASE,NULL; coiled-coil,NULL; no descr,CUFF.50169.1
(2658 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO009119 similar to UniRef100_A7PFD9 Cluster: Chromosom... 1356 0.0
gnl|LJGI|TC68788 homologue to UniRef100_A7QWG7 Cluster: Chromoso... 349 6e-95
gnl|LJGI|BP039566 similar to UniRef100_Q22AJ2 Cluster: AhpC/TSA ... 82 2e-14
>gnl|LJGI|GO009119 similar to UniRef100_A7PFD9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 706
Score = 1356 bits (684), Expect = 0.0
Identities = 698/700 (99%), Gaps = 2/700 (0%)
Strand = Plus / Plus
Query: 1785 tcggattgctgaggccatcagaaggaacccacgttctgtcatcatgcttgaggacattga 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcggattgctgaggccatcagaaggaacccacgttctgtcatcatgcttgaggacattga 61
Query: 1845 tgaagccaacaccctcctccgtgggagcatcaaaagagccatggagcaagggaggttccc 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgaagccaacaccctcctccgtgggagcatcaaaagagccatggagcaagggaggttccc 121
Query: 1905 agattctcacgggcgtgaaatcagcctcgggaatgtcatgttcatcctcactgcaaattg 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agattctcacgggcgtgaaatcagcctcgggaatgtcatgttcatcctcactgcaaattg 181
Query: 1965 gttgccagaggacctgagatacctctccaatggcaccccacttgatgaagaaaagctcgc 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gttgccagaggacctgagatacctctccaatggcaccccacttgatgaagaaaagctcgc 241
Query: 2025 aaatttcgccagtggggattggcaactgcggctatcagtggctaagagagcatcaaaacg 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaatttcgccagtggggattggcaactgcggctatcagtggctaagagagcatcaaaacg 301
Query: 2085 cagacccagttggttatccgatgaagacaggtctttgaagccacgaaaggaaatcaattc 2144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cagacccagttggttatccgatgaagacaggtctttgaagccacgaaaggaaatcaattc 361
Query: 2145 agggttatcatttgatctcaatgaagccgctgccgatattgcagaggaagacagggcaga 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agggttatcatttgatctcaatgaagccgctgccgatattgcagaggaagacagggcaga 421
Query: 2205 cggatcacattcacataattccagtgacttcacagtggatcatgaagacaacagcaacaa 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cggatcacattcacataattccagtgacttcacagtggatcatgaagacaacagcaacaa 481
Query: 2265 ccacctcgatgggggaggatcaagctccataatacctcgtgagttactggattctgtgga 2324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccacctcgatgggggaggatcaagctccataatacctcgtgagttactggattctgtgga 541
Query: 2325 tgatgccattgtcttcaagccattgaatttcgaccttcttcgccggaatttcaaggcgtc 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgatgccattgtcttcaagccattgaatttcgaccttcttcgccggaatttcaaggcgtc 601
Query: 2385 aatctcaaagaggttctctgccgtggtgggtagtgggatctcaattgaagtgcaggagga 2444
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 602 aatctcaaagaggttctctgccgtggtgggtagtgggatctcaattgaagtgca-gagga 660
Query: 2445 tgctcttgacaagattgccagtggagtgtggttaggccaa 2484
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 661 tgctcttgacaaga-tgccagtggagtgtggttaggccaa 699
>gnl|LJGI|TC68788 homologue to UniRef100_A7QWG7 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 537
Score = 349 bits (176), Expect = 6e-95
Identities = 179/180 (99%)
Strand = Plus / Plus
Query: 2479 ggccaaaccaccatagatgaatggatggacaaggtgttggttcccaccttccagcagctg 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggccaaaccaccatagatgaatggatggacaaggtgttggttcccaccttccagcagctg 61
Query: 2539 aaaaagcagaacttcaatacaaacaccaatcatgacaatgagtcttgttcgctgctggtt 2598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaaaagcagaacttcaatacaaacaccaatcatgacaatgagtcttgttcgctgctggtt 121
Query: 2599 aggctggaagatgatgatggctactccgatcgccgcagtaaccaagaatggttacctggt 2658
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aggctggaagatgacgatggctactccgatcgccgcagtaaccaagaatggttacctggt 181
>gnl|LJGI|BP039566 similar to UniRef100_Q22AJ2 Cluster: AhpC/TSA family protein; n=1;
Tetrahymena thermophila SB210|Rep: AhpC/TSA family
protein - Tetrahymena thermophila SB210, partial (6%)
Length = 510
Score = 81.8 bits (41), Expect = 2e-14
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 484 ttgaaatggctggtggaggggtttggggttggtggtttggggaatatgcagcaaccgacg 543
||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 167 ttgaaatggctcatgggcgggtttggggttggtggtttggggaacatgcagcaacctacg 108
Query: 544 ctcgccgac 552
|| ||||||
Sbjct: 107 cttgccgac 99
Score = 67.9 bits (34), Expect = 3e-10
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 702 agtgccaattacaaccagagcacctcttcctggaatgtttcc 743
||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 92 agtgccaattacaaccagaacacctctgcctggaatgtttcc 51