Miyakogusa Predicted Gene
- Lj4g3v2023870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2023870.1 Non Chatacterized Hit- tr|C5Z5V3|C5Z5V3_SORBI
Putative uncharacterized protein Sb10g005930
OS=Sorghu,28.3,0.00000003,RING/U-box,NULL; seg,NULL; ZF_RING_2,Zinc
finger, RING-type; OS01G0736600 PROTEIN (FRAGMENT),NULL;
R,CUFF.50158.1
(1572 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318266 similar to UniRef100_A7PFF9 Cluster: Chromosom... 1199 0.0
gnl|LJGI|FS345260 similar to UniRef100_A7PFF9 Cluster: Chromosom... 523 e-147
gnl|LJGI|BP049986 similar to UniRef100_A7PFF9 Cluster: Chromosom... 234 1e-60
>gnl|LJGI|FS318266 similar to UniRef100_A7PFF9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 746
Score = 1199 bits (605), Expect = 0.0
Identities = 605/605 (100%)
Strand = Plus / Plus
Query: 1 atgggtagaaatttcactcaacaaggagacacctttctacctccgtcagaacaaccgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atgggtagaaatttcactcaacaaggagacacctttctacctccgtcagaacaaccgcca 201
Query: 61 ttttttctccctcaatctcaaccttcaccacccaccaccaccgttcgatctgacagcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttttttctccctcaatctcaaccttcaccacccaccaccaccgttcgatctgacagcagc 261
Query: 121 agcagtttcagtttcaacgacaaggccttgaaggttagtcccagcatactcctcatcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agcagtttcagtttcaacgacaaggccttgaaggttagtcccagcatactcctcatcatc 321
Query: 181 atcattctcgccatcgttttcttcatctccggtttgctccacctcctcgttagattcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atcattctcgccatcgttttcttcatctccggtttgctccacctcctcgttagattcctc 381
Query: 241 tggcggccaccgagcagagaaaccgatgatttggacagtgtcaccgcccttcaaggccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tggcggccaccgagcagagaaaccgatgatttggacagtgtcaccgcccttcaaggccag 441
Query: 301 ttacagcaactcttccacctccatgatgctggtgttgaccagtctttcattgacaccctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttacagcaactcttccacctccatgatgctggtgttgaccagtctttcattgacaccctc 501
Query: 361 cctgttttccctttcaaagctatcattgggttgaagaacccttttgactgtgctgtttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cctgttttccctttcaaagctatcattgggttgaagaacccttttgactgtgctgtttgt 561
Query: 421 ttgtgtgaatttgaaccagaagacaagcttagattgttgccgaaatgtagccatgccttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttgtgtgaatttgaaccagaagacaagcttagattgttgccgaaatgtagccatgccttt 621
Query: 481 cacatggagtgtattgacacatggttgttgtcacattctacttgtcctctttgtagagcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cacatggagtgtattgacacatggttgttgtcacattctacttgtcctctttgtagagcg 681
Query: 541 agtttgctacctgaattctctgcaaacaataaccgttcccccattgttcttgttctggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agtttgctacctgaattctctgcaaacaataaccgttcccccattgttcttgttctggaa 741
Query: 601 tctgg 605
|||||
Sbjct: 742 tctgg 746
>gnl|LJGI|FS345260 similar to UniRef100_A7PFF9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 643
Score = 523 bits (264), Expect = e-147
Identities = 270/272 (99%)
Strand = Plus / Minus
Query: 1121 atcttgctgggacttcaagtgcttgtagtggaaatggtgctgctattggaaagagcagaa 1180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 atcttgctggggcttcaagtgcttgtagtggaaatggtgctgctattggaaagagcagaa 584
Query: 1181 aggagagtttttctatatcaaagatttggctcagggggaagaaggatagggcgaattcgg 1240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aggaaagtttttctatatcaaagatttggctcagggggaagaaggatagggcgaattcgg 524
Query: 1241 cggcggattcgtcgagaaggtctgtttcattcaggttcccggcaccgcgcaatgccgctt 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cggcggattcgtcgagaaggtctgtttcattcaggttcccggcaccgcgcaatgccgctt 464
Query: 1301 ctgtcggtgatgcagatgatttgaaggctaggagaaacaaatttgacacaaggagtgtta 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctgtcggtgatgcagatgatttgaaggctaggagaaacaaatttgacacaaggagtgtta 404
Query: 1361 tttctgagatggattttgggaaatgggagaat 1392
||||||||||||||||||||||||||||||||
Sbjct: 403 tttctgagatggattttgggaaatgggagaat 372
Score = 228 bits (115), Expect = 8e-59
Identities = 115/115 (100%)
Strand = Plus / Minus
Query: 1432 agtgagtttggctatgatgaagaaaaccagagctgctatagtatggattctcaagctagg 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agtgagtttggctatgatgaagaaaaccagagctgctatagtatggattctcaagctagg 288
Query: 1492 gcaccttcttttgctagaaggactttgctttggcttactggaagacagaataagg 1546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gcaccttcttttgctagaaggactttgctttggcttactggaagacagaataagg 233
>gnl|LJGI|BP049986 similar to UniRef100_A7PFF9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 608
Score = 234 bits (118), Expect = 1e-60
Identities = 124/126 (98%)
Strand = Plus / Minus
Query: 1267 tcattcaggttcccggcaccgcgcaatgccgcttctgtcggtgatgcagatgatttgaag 1326
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tcattcagttccccggcaccgcgcaatgccgcttctgtcggtgatgcagatgatttgaag 549
Query: 1327 gctaggagaaacaaatttgacacaaggagtgttatttctgagatggattttgggaaatgg 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gctaggagaaacaaatttgacacaaggagtgttatttctgagatggattttgggaaatgg 489
Query: 1387 gagaat 1392
||||||
Sbjct: 488 gagaat 483
Score = 228 bits (115), Expect = 8e-59
Identities = 115/115 (100%)
Strand = Plus / Minus
Query: 1432 agtgagtttggctatgatgaagaaaaccagagctgctatagtatggattctcaagctagg 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtgagtttggctatgatgaagaaaaccagagctgctatagtatggattctcaagctagg 384
Query: 1492 gcaccttcttttgctagaaggactttgctttggcttactggaagacagaataagg 1546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcaccttcttttgctagaaggactttgctttggcttactggaagacagaataagg 329