Miyakogusa Predicted Gene

Lj4g3v2018300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2018300.1 NODE_12039_length_1727_cov_60.621307.path2.1
         (492 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW597142 similar to UniRef100_A7PFJ0 Cluster: Chromosom...   513   e-145
gnl|LJGI|BP032701 similar to UniRef100_A7PFJ0 Cluster: Chromosom...   208   2e-53

>gnl|LJGI|BW597142 similar to UniRef100_A7PFJ0 Cluster: Chromosome chr11 scaffold_14,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_14, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 484

 Score =  513 bits (259), Expect = e-145
 Identities = 259/259 (100%)
 Strand = Plus / Plus

                                                                       
Query: 234 agctgatgggagccctcaagacctctttgaaaaagtagtaacagtatctgaggctaaaca 293
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   agctgatgggagccctcaagacctctttgaaaaagtagtaacagtatctgaggctaaaca 64

                                                                       
Query: 294 aatggcacccaggacatcttcaagatcaaggaaaaacgatgtaattgatctttgcgtaga 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aatggcacccaggacatcttcaagatcaaggaaaaacgatgtaattgatctttgcgtaga 124

                                                                       
Query: 354 caatgaactagggtttgcaaaagaccggaccattagcaggcttacagagcttaacagcaa 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 caatgaactagggtttgcaaaagaccggaccattagcaggcttacagagcttaacagcaa 184

                                                                       
Query: 414 ggaatacttagagcatcatgctgcaacgttagcagaaaagaaagaaagagtggatcagaa 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggaatacttagagcatcatgctgcaacgttagcagaaaagaaagaaagagtggatcagaa 244

                              
Query: 474 tgtccttgaagcttgaaga 492
           |||||||||||||||||||
Sbjct: 245 tgtccttgaagcttgaaga 263


>gnl|LJGI|BP032701 similar to UniRef100_A7PFJ0 Cluster: Chromosome chr11 scaffold_14,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_14, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 434

 Score =  208 bits (105), Expect = 2e-53
 Identities = 133/141 (94%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                       
Query: 353 acaatgaactagggtttgcaaaagaccggaccattagcaggcttacagagcttaacagca 412
           ||||||||||||||||||| |||||||||||||||||||||||| | |||||| || |||
Sbjct: 434 acaatgaactagggtttgccaaagaccggaccattagcaggcttccggagctttaccgca 375

                                                                       
Query: 413 aggaata-cttagagcatcatgctgcaacgttagcagaaaagaaagaaagagtggatcag 471
           ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 374 aggaatagcttagagcctcatgctgcaacgttagcagataagaaagaaagagtggatcag 315

                                
Query: 472 aatgtccttgaagcttgaaga 492
           |||||||||||||||||||||
Sbjct: 314 aatgtccttgaagcttgaaga 294