Miyakogusa Predicted Gene
- Lj4g3v2014120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2014120.1 tr|A9STJ2|A9STJ2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_83795
,34.01,0.000000000000003,seg,NULL; SUBFAMILY NOT NAMED,NULL;
NUCLEOPORIN NUP43,NULL,CUFF.50097.1
(541 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73932 similar to UniRef100_A7PFK6 Cluster: Chromosome... 888 0.0
>gnl|LJGI|TC73932 similar to UniRef100_A7PFK6 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1136
Score = 888 bits (448), Expect = 0.0
Identities = 451/452 (99%)
Strand = Plus / Plus
Query: 1 atggcagtgacggcaaattcagaaacctcaagaatccacagattcccacaatacaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggcagtgacggcaaattcagaaacctcaagaatccacagattcccacaatacaaatac 147
Query: 61 atcgacgcagttcgttggcttcctctggtttcagcattcgatcgcttcgcagttctcgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atcgacgcagttcgttggcttcctctggtttcagcattcgatcgcttcgcagttctcgct 207
Query: 121 tccttcgacttcgattccgatgcttcttccatcgaaatccactctttcaaaccaaaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tccttcgacttcgattccgatgcttcttccatcgaaatccactctttcaaaccaaaccct 267
Query: 181 ctttccttcgaaccccaatcttcatggactccaccttctcgcgtttcctccctcaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctttccttcgaaccccaatcttcatggactccaccttctcgcgtttcctccctcaaggcc 327
Query: 241 gcgcagttccttcagaagaccgtcatcgccgcctcaacctcctccggctccctccacttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gcgcagttccttcagaagaccgtcatcgccgcctcaacctcctccggctccctccacttc 387
Query: 301 ctgttctccgatcccgccgacgccacgctggaatcggaggtttcggtgcccgaggggaag 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 388 ctgttctccgatcccgccgacgccacgctggaatcggaggtttcggtggccgaggggaag 447
Query: 361 cttcactcggtgcctaagtcttgtgttgatttgatggatggtggggtggagtgtgtgacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cttcactcggtgcctaagtcttgtgttgatttgatggatggtggggtggagtgtgtgacg 507
Query: 421 gctggtgaagatgggagggtgaacttggtgac 452
||||||||||||||||||||||||||||||||
Sbjct: 508 gctggtgaagatgggagggtgaacttggtgac 539
Score = 176 bits (89), Expect = 9e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 453 cgcctacggagttcgctaccggtggttatgggtttggtcttcaatggtgggatcagagga 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cgcctacggagttcgctaccggtggttatgggtttggtcttcaatggtgggatcagagga 679
Query: 513 agccgggtggaccggtttctcagtttaag 541
|||||||||||||||||||||||||||||
Sbjct: 680 agccgggtggaccggtttctcagtttaag 708