Miyakogusa Predicted Gene
- Lj4g3v2003030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2003030.1 tr|A9TWE0|A9TWE0_PHYPA 50S ribosomal protein L35
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAF,63.51,1e-17,rpmI_bact: ribosomal protein L35,Ribosomal
protein L35, non-mitochondrial; RIBOSOMALL35,Ribosomal pr,CUFF.50086.1
(447 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60787 similar to UniRef100_A5BPA4 Cluster: 50S riboso... 886 0.0
gnl|LJGI|TC63196 similar to UniRef100_P23326 Cluster: 50S riboso... 801 0.0
gnl|LJGI|TC64092 similar to UniRef100_A5BPA4 Cluster: 50S riboso... 793 0.0
>gnl|LJGI|TC60787 similar to UniRef100_A5BPA4 Cluster: 50S ribosomal protein L35;
n=1; Vitis vinifera|Rep: 50S ribosomal protein L35 -
Vitis vinifera (Grape), partial (52%)
Length = 750
Score = 886 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 1 atggcgctggcttctgcgacggcaacggcgtcctccgccttcagtttcctaccatgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atggcgctggcttctgcgacggcaacggcgtcctccgccttcagtttcctaccatgctct 119
Query: 61 tcttctccgacccgtctctcttacgcttcagttcgattacctccatcacacaaaaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tcttctccgacccgtctctcttacgcttcagttcgattacctccatcacacaaaaccaac 179
Query: 121 tcggtcaaactcagttcatcagcttgcatttccactccaatttttcaacaaaagctctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tcggtcaaactcagttcatcagcttgcatttccactccaatttttcaacaaaagctctgc 239
Query: 181 accgttactcctccgtcgtctcgctctctcaccattgtagctgctaaaggctacaaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 accgttactcctccgtcgtctcgctctctcaccattgtagctgctaaaggctacaaaatg 299
Query: 241 aaaactcacaaggcgtcggcaaagcgatttcgcgtgacgggtaaagggaaaatcgtgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aaaactcacaaggcgtcggcaaagcgatttcgcgtgacgggtaaagggaaaatcgtgcgt 359
Query: 301 aggagagctggaaagcagcatttgctgcagaagaagaataccaagaggaaattgagactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aggagagctggaaagcagcatttgctgcagaagaagaataccaagaggaaattgagactc 419
Query: 361 tccaaaatgcacccggttaacaggagtgactatgacaacgtaattggagccttgccatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tccaaaatgcacccggttaacaggagtgactatgacaacgtaattggagccttgccatat 479
Query: 421 ctgaaagtaaacagaaatgctacatag 447
|||||||||||||||||||||||||||
Sbjct: 480 ctgaaagtaaacagaaatgctacatag 506
>gnl|LJGI|TC63196 similar to UniRef100_P23326 Cluster: 50S ribosomal protein L35,
chloroplast precursor; n=1; Spinacia oleracea|Rep: 50S
ribosomal protein L35, chloroplast precursor - Spinacia
oleracea (Spinach), partial (56%)
Length = 776
Score = 801 bits (404), Expect = 0.0
Identities = 425/432 (98%)
Strand = Plus / Plus
Query: 16 gcgacggcaacggcgtcctccgccttcagtttcctaccatgctcttcttctccgacccgt 75
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 gcgacggcaatggcgtcctccgccttcagtttcctaccatgctcttcttctccgacccgt 102
Query: 76 ctctcttacgcttcagttcgattacctccatcacacaaaaccaactcggtcaaactcagt 135
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 103 ctctcttacgcttcagttcgattacctccatcaatcaaaaccaactcggttaaactcagt 162
Query: 136 tcatcagcttgcatttccactccaatttttcaacaaaagctctgcaccgttactcctccg 195
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 163 tcttcagcttgcatttccactccaatttttcaaccaaagctctgcaccgttactcctccg 222
Query: 196 tcgtctcgctctctcaccattgtagctgctaaaggctacaaaatgaaaactcacaaggcg 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcgtctcgctctctcaccattgtagctgctaaaggctacaaaatgaaaactcacaaggcg 282
Query: 256 tcggcaaagcgatttcgcgtgacgggtaaagggaaaatcgtgcgtaggagagctggaaag 315
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcggcaaagcgatttcgcgtgactggtaaagggaaaatcgtgcgtaggagagctggaaag 342
Query: 316 cagcatttgctgcagaagaagaataccaagaggaaattgagactctccaaaatgcacccg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cagcatttgctgcagaagaagaataccaagaggaaattgagactctccaaaatgcacccg 402
Query: 376 gttaacaggagtgactatgacaacgtaattggagccttgccatatctgaaagtaaacaga 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gttaacaggagtgactatgacaacgtaattggagccttgccatatctgaaagtaaacaga 462
Query: 436 aatgctacatag 447
||||||||||||
Sbjct: 463 aatgctacatag 474
>gnl|LJGI|TC64092 similar to UniRef100_A5BPA4 Cluster: 50S ribosomal protein L35;
n=1; Vitis vinifera|Rep: 50S ribosomal protein L35 -
Vitis vinifera (Grape), partial (52%)
Length = 714
Score = 793 bits (400), Expect = 0.0
Identities = 424/432 (98%)
Strand = Plus / Plus
Query: 16 gcgacggcaacggcgtcctccgccttcagtttcctaccatgctcttcttctccgacccgt 75
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gcgacggcaatggcgtcctccgccttcagtttcctaccatgctcttcttctccgacccgt 140
Query: 76 ctctcttacgcttcagttcgattacctccatcacacaaaaccaactcggtcaaactcagt 135
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 141 ctctcttacgcttcagttcgattacctccatcaatcaaaaccaactcggttaaactcagt 200
Query: 136 tcatcagcttgcatttccactccaatttttcaacaaaagctctgcaccgttactcctccg 195
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tcttcagcttgcatttccactccaatttttcaaccaaagctctgcaccgttactcctccg 260
Query: 196 tcgtctcgctctctcaccattgtagctgctaaaggctacaaaatgaaaactcacaaggcg 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgtctcgctctctcaccattgtagctgctaaaggctacaaaatgaaaactcacaaggcg 320
Query: 256 tcggcaaagcgatttcgcgtgacgggtaaagggaaaatcgtgcgtaggagagctggaaag 315
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcggcaaagcgatttcgcgtgactggtaaagggaaaatcgtgcgtaggagagctggaaag 380
Query: 316 cagcatttgctgcagaagaagaataccaagaggaaattgagactctccaaaatgcacccg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcatttgctgcagaagaagaataccaagaggaaattgagactctccaaaatgcacccg 440
Query: 376 gttaacaggagtgactatgacaacgtaattggagccttgccatatctgaaagtaaacaga 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttaacaggagtgactatgacaacgtaattggagccttgccatatctgaaagtaaacaga 500
Query: 436 aatgctacatag 447
|||||||||||
Sbjct: 501 gatgctacatag 512