Miyakogusa Predicted Gene
- Lj4g3v1986770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1986770.1 Non Chatacterized Hit- tr|D7MVA0|D7MVA0_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,31.69,8e-19,no
description,NULL; PUTATIVE UNCHARACTERIZED PROTEIN,NULL; F-BOX/LEUCINE
RICH REPEAT PROTEIN,NULL;
,NODE_22856_length_1246_cov_301.341095.path2.1
(921 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57273 similar to UniRef100_A7PFP9 Cluster: Chromosome... 1826 0.0
gnl|LJGI|TC81844 similar to UniRef100_A7PFP9 Cluster: Chromosome... 180 1e-44
gnl|LJGI|AV771368 similar to UniRef100_A7PFP9 Cluster: Chromosom... 143 2e-33
gnl|LJGI|AV770351 homologue to UniRef100_Q91313 Cluster: Ryanodi... 68 1e-10
>gnl|LJGI|TC57273 similar to UniRef100_A7PFP9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 1264
Score = 1826 bits (921), Expect = 0.0
Identities = 921/921 (100%)
Strand = Plus / Plus
Query: 1 atggaaaacgaggtagaagaaggaagcgattcagagtggagcgagttgactcgggagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggaaaacgaggtagaagaaggaagcgattcagagtggagcgagttgactcgggagtgc 140
Query: 61 ctcatcaacatcctctctcgactcaccgttgacgatctatggcgaggcaccatgcttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctcatcaacatcctctctcgactcaccgttgacgatctatggcgaggcaccatgcttgtc 200
Query: 121 tgcaaatcatggttcagcgccttcaaggaaccctctcttcactctgtcttcaacctcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaaatcatggttcagcgccttcaaggaaccctctcttcactctgtcttcaacctcgac 260
Query: 181 cccctcttcgactcgccccgcgagttgcctcgctggtggtcccccgaattcgaggccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccctcttcgactcgccccgcgagttgcctcgctggtggtcccccgaattcgaggccaaa 320
Query: 241 atcgattccatgcttcgctctgttgttcaatggacccatatcttcctcacccagatccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcgattccatgcttcgctctgttgttcaatggacccatatcttcctcacccagatccgt 380
Query: 301 attcgtcactgctctgatcgctccctcgctttggtcgccgaaagatgcccaaatcttgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcgtcactgctctgatcgctccctcgctttggtcgccgaaagatgcccaaatcttgag 440
Query: 361 gtgttgtcaatcagaagctgccctcatgttactgatgattctatctctaggattgctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgttgtcaatcagaagctgccctcatgttactgatgattctatctctaggattgctgtt 500
Query: 421 aattgtccaaagcttagggaattggacatcagctattgttatgatgtaacacataagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattgtccaaagcttagggaattggacatcagctattgttatgatgtaacacataagtca 560
Query: 481 ttggctctgattggaagaaattgccccaatcttaaggttctgaagagaaatctcatgaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttggctctgattggaagaaattgccccaatcttaaggttctgaagagaaatctcatgaac 620
Query: 541 tggcttgatccttctcagcacgttgggattgttcctgatgaatatctaaatgcttgtccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggcttgatccttctcagcacgttgggattgttcctgatgaatatctaaatgcttgtccg 680
Query: 601 caagacggggatactgaggctgctgcaattgcaaggtccatgcctcatctagagtggctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagacggggatactgaggctgctgcaattgcaaggtccatgcctcatctagagtggctt 740
Query: 661 gagattaggttctccaagttgtcagctaaaggcctcaatttgatatgtcagaggtgtcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagattaggttctccaagttgtcagctaaaggcctcaatttgatatgtcagaggtgtcct 800
Query: 721 aaccttgagtttttggatctttccgggtgtgctaacttaactagtcgagacattgctaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaccttgagtttttggatctttccgggtgtgctaacttaactagtcgagacattgctaat 860
Query: 781 gcatcttccagtttggcacacttgaaagacatcaaaaagcctaatttctacattccaagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gcatcttccagtttggcacacttgaaagacatcaaaaagcctaatttctacattccaagg 920
Query: 841 tctgtctttcacactgaaaggtatggacattggcaattgtatgatgagagatttcagaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 tctgtctttcacactgaaaggtatggacattggcaattgtatgatgagagatttcagaca 980
Query: 901 gatgttttccgaatttgagca 921
|||||||||||||||||||||
Sbjct: 981 gatgttttccgaatttgagca 1001
>gnl|LJGI|TC81844 similar to UniRef100_A7PFP9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 462
Score = 180 bits (91), Expect = 1e-44
Identities = 122/131 (93%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 786 ttccagtttggcacacttgaaagacatcaaaaagcctaatttctacattccaaggtctgt 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccagtttggcacacttgaaagacatcaaaaagcctaatttctacattccaaggtctgt 60
Query: 846 ctttcacactgaaaggtatggacattggcaattgtatg-atgagagatttcagacagatg 904
|||||||||||||||||| ||| |||| | |||| | |||||||||||||||||||||
Sbjct: 61 ctttcacactgaaaggtaaggaacatggccaatgtaagaatgagagatttcagacagatg 120
Query: 905 ttttccgaatt 915
||| |||||||
Sbjct: 121 tttcccgaatt 131
>gnl|LJGI|AV771368 similar to UniRef100_A7PFP9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 342
Score = 143 bits (72), Expect = 2e-33
Identities = 81/84 (96%)
Strand = Plus / Minus
Query: 838 aggtctgtctttcacactgaaaggtatggacattggcaattgtatgatgagagatttcag 897
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 340 aggtctgtctttcacactgaaaggtatggaccttggccattgtatgatgagagatttcag 281
Query: 898 acagatgttttccgaatttgagca 921
|||||||||||||| |||||||||
Sbjct: 280 acagatgttttccggatttgagca 257
>gnl|LJGI|AV770351 homologue to UniRef100_Q91313 Cluster: Ryanodine receptor alpha
isoform; n=1; Rana catesbeiana|Rep: Ryanodine receptor
alpha, partial (0%)
Length = 265
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 871 tggcaattgtatgatgagagatttcagacagatgttttccgaatttgagc 920
|||| |||||||||||||||||||||| | |||||||| |||||||||||
Sbjct: 265 tggccattgtatgatgagagatttcagtctgatgtttttcgaatttgagc 216