Miyakogusa Predicted Gene
- Lj4g3v1983620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1983620.1 tr|C1MW67|C1MW67_MICPC Type II secretory pathway
family protein OS=Micromonas pusilla (strain
CCMP15,46.79,3e-18,SRP54,Signal recognition particle, SRP54 subunit,
GTPase domain; seg,NULL; SRP-alpha_N,Signal recogn,CUFF.50092.1
(1848 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71730 homologue to UniRef100_A7PFQ9 Cluster: Chromoso... 1667 0.0
gnl|LJGI|TC69842 homologue to UniRef100_A7PFQ9 Cluster: Chromoso... 904 0.0
gnl|LJGI|TC77258 homologue to UniRef100_A7PFQ9 Cluster: Chromoso... 745 0.0
gnl|LJGI|GO031054 homologue to UniRef100_A7PFQ9 Cluster: Chromos... 387 e-106
>gnl|LJGI|TC71730 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1162
Score = 1667 bits (841), Expect = 0.0
Identities = 855/862 (99%)
Strand = Plus / Plus
Query: 987 ggagccagctttgaaagctctgaaggataggctcatgactaagaatgtggctgaggaaat 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagccagctttgaaagctctgaaggataggctcatgactaagaatgtggctgaggaaat 60
Query: 1047 agctgagaaactatgtgagtcagtggcagcaagtcttgaaggnnnnnnnctggcttcatt 1106
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 agctgagaaactatgtgagtcagtggcagcaagtcttgaaggaaaaaaactggcttcatt 120
Query: 1107 tacaaggatatcttcaacagtgcatgcagcaatggaagaagctcttgttcgtattttaac 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaaggatatcttcaacagtgcatgcagcaatggaagaagctcttgttcgtattttaac 180
Query: 1167 tcctaggcgttctattgacattttgagggacattcatgcagccaaagagcataggaaacc 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcctaggcgttctattgacattttgagggacattcatgcagccaaagagcataggaaacc 240
Query: 1227 atatgttgttgtatttgttggagttaatggagttggaaaatccactaatctagccaaggt 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atatgttgttgtatttgttggagttaatggagttggaaaatccactaatctagccaaggt 300
Query: 1287 tgcttactggcttcaacaacacaatgttagtgtcatgatggctgcttgtgatacatttcg 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcttactggcttcaacaacacaatgttagtgtcatgatggctgcttgtgatacatttcg 360
Query: 1347 atcaggagctgttgagcagctacggacacatgcacgaagacttcagatccctatctttga 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcaggagctgttgagcagctacggacacatgcacgaagacttcagatccctatctttga 420
Query: 1407 gaagggctatgaaaaggatcctgcgcttgtggcaaaagaagcaattcaggaagcttcacg 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagggctatgaaaaggatcctgcgcttgtggcaaaagaagcaattcaggaagcttcacg 480
Query: 1467 caatggttcagatgttgttctagttgatacagctggtcgtatgcaggataatgaaccatt 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caatggttcagatgttgttctagttgatacagctggtcgtatgcaggataatgaaccatt 540
Query: 1527 gatgagagcactgtcaaagctgatctatcttaacaatcctgacctggtcttatttgttgg 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatgagagcactgtcaaagctgatctatcttaacaatcctgacctggtcttatttgttgg 600
Query: 1587 agaagcactggttggtaatgatgcagttgatcagctttcaaagttcaatcagaaactagc 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaagcactggttggtaatgatgcagttgatcagctttcaaagttcaatcagaaactagc 660
Query: 1647 cgacctctcaacatctctcacacccagattgatagatgggatcttgctcacaaagtttga 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgacctctcaacatctctcacacccagattgatagatgggatcttgctcacaaagtttga 720
Query: 1707 caccatagatgataaggttggagctgcactttcaatggtttacatatctggagctccagt 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caccatagatgataaggttggagctgcactttcaatggtttacatatctggagctccagt 780
Query: 1767 catgtttgtgggttgcggacagtcctacactgacctcaagaaactcaacgtcaagtcgat 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 catgtttgtgggttgcggacagtcctacactgacctcaagaaactcaacgtcaagtcgat 840
Query: 1827 agtgaaaaccctccttaaatga 1848
||||||||||||||||||||||
Sbjct: 841 agtgaaaaccctccttaaatga 862
>gnl|LJGI|TC69842 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 981
Score = 904 bits (456), Expect = 0.0
Identities = 704/789 (89%)
Strand = Plus / Plus
Query: 1060 tgtgagtcagtggcagcaagtcttgaaggnnnnnnnctggcttcatttacaaggatatct 1119
||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 5 tgtgaatcagtggcagcaagtcttgaaggaaaaaagctagcttcatttacaaggatatct 64
Query: 1120 tcaacagtgcatgcagcaatggaagaagctcttgttcgtattttaactcctaggcgttct 1179
||||||||||| || ||||||||||| || |||||||| |||||||||||||| || |||
Sbjct: 65 tcaacagtgcaagctgcaatggaagacgcacttgttcgaattttaactcctagacgctct 124
Query: 1180 attgacattttgagggacattcatgcagccaaagagcataggaaaccatatgttgttgta 1239
||||| || | || || | ||||| |||| ||||| ||||||||||| || ||||||
Sbjct: 125 attgatatactaagagatgtgcatgctgccagggagcaaaggaaaccatacgtcgttgta 184
Query: 1240 tttgttggagttaatggagttggaaaatccactaatctagccaaggttgcttactggctt 1299
|||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 185 tttgttggtgttaatggtgttggaaaatcaactaatctagctaaggttgcttactggctt 244
Query: 1300 caacaacacaatgttagtgtcatgatggctgcttgtgatacatttcgatcaggagctgtt 1359
| ||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 245 ctacagcacaatgttagtgttatgatggctgcttgtgacacatttcgatcaggggctgtt 304
Query: 1360 gagcagctacggacacatgcacgaagacttcagatccctatctttgagaagggctatgaa 1419
|||||||| ||||| ||||| || |||||||||||||| || |||||||||||||||||
Sbjct: 305 gagcagctccggacccatgctcggagacttcagatccccatatttgagaagggctatgag 364
Query: 1420 aaggatcctgcgcttgtggcaaaagaagcaattcaggaagcttcacgcaatggttcagat 1479
|| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaagatcctgccatcgtggcaaaagaagcaattcaggaagcttcacgcaatggttcagat 424
Query: 1480 gttgttctagttgatacagctggtcgtatgcaggataatgaaccattgatgagagcactg 1539
|| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 425 gtggttctagttgacactgctggtcgtatgcaggataatgaaccactgatgagagcactg 484
Query: 1540 tcaaagctgatctatcttaacaatcctgacctggtcttatttgttggagaagcactggtt 1599
||||| || ||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 485 tcaaaactcatctacctcaacaacccagatctagtcttatttgttggagaagcactggtt 544
Query: 1600 ggtaatgatgcagttgatcagctttcaaagttcaatcagaaactagccgacctctcaaca 1659
|||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||||
Sbjct: 545 ggtaatgatgcagttgatcagctttcgaagttcaatcagaaacttgcggacctcgcaaca 604
Query: 1660 tctctcacacccagattgatagatgggatcttgctcacaaagtttgacaccatagatgat 1719
|||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 605 tctcctaatccaagattgatagatgggatcttgctcacaaagtttgacaccattgatgat 664
Query: 1720 aaggttggagctgcactttcaatggtttacatatctggagctccagtcatgtttgtgggt 1779
||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 665 aaggtgggagctgcactttcaatggtttacatatctggagcacctgtcatgtttgtgggg 724
Query: 1780 tgcggacagtcctacactgacctcaagaaactcaacgtcaagtcgatagtgaaaaccctc 1839
|| |||||||| || |||||||| ||||||||||| ||||| || |||||||| || |||
Sbjct: 725 tgtggacagtcttatactgacctgaagaaactcaatgtcaaatcaatagtgaagactctc 784
Query: 1840 cttaaatga 1848
|||||||||
Sbjct: 785 cttaaatga 793
>gnl|LJGI|TC77258 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 502
Score = 745 bits (376), Expect = 0.0
Identities = 379/380 (99%)
Strand = Plus / Plus
Query: 1 atgttagagcagttgctgattttcacaagaggaggattgatcctatggagttggggaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atgttagagcagttgctgattttcacaagaggaggattgatcctatggagttggggaaac 182
Query: 61 gcgttgaagggatcaccgatcgacacgttgatccgatcctgtcttctcgaggagcgatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcgttgaagggatcaccgatcgacacgttgatccgatcctgtcttctcgaggagcgatcc 242
Query: 121 ggtgcggcatcgtacacgcatgactcctactccctcaaatggaccttccacaatgatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggtgcggcatcgtacacgcatgactcctactccctcaaatggaccttccacaatgatctc 302
Query: 181 ggcctcgtcttcgtcgccgtctaccagcgcattctccacctcttgtacgtcgacgacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggcctcgtcttcgtcgccgtctaccagcgcattctccacctcttgtacgtcgacgacttg 362
Query: 241 ctcgccgccgtcaagcgcgaattctcgctgatccacgatcccagcaagaaaacgctctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctcgccgccgtcaagcgcgaattctcgctgatccacgatcccagcaagaaaacgctctac 422
Query: 301 ccagattttgatgagactttccggcagctcaagatcgaagccgaggctcgcgccgaggat 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 423 ccagattttgatgagactttccagcagctcaagatcgaagccgaggctcgcgccgaggat 482
Query: 361 ctgaagaaatcgtcgaatgc 380
||||||||||||||||||||
Sbjct: 483 ctgaagaaatcgtcgaatgc 502
>gnl|LJGI|GO031054 homologue to UniRef100_A7PFQ9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 629
Score = 387 bits (195), Expect = e-106
Identities = 291/323 (90%)
Strand = Plus / Minus
Query: 1526 tgatgagagcactgtcaaagctgatctatcttaacaatcctgacctggtcttatttgttg 1585
||||||||||||||||||| || ||||| || ||||| || || | |||||||||||||
Sbjct: 450 tgatgagagcactgtcaaaactcatctacctcaacaacccagatccagtcttatttgttg 391
Query: 1586 gagaagcactggttggtaatgatgcagttgatcagctttcaaagttcaatcagaaactag 1645
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 390 gagaagcactggttggtaatgatgcagttgatcagctttcgaagttcaatcagaaacttg 331
Query: 1646 ccgacctctcaacatctctcacacccagattgatagatgggatcttgctcacaaagtttg 1705
| |||||| ||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 330 cggacctcgcaacatctcctaatccaagattgatagatgggatcttgctcacaaagtttg 271
Query: 1706 acaccatagatgataaggttggagctgcactttcaatggtttacatatctggagctccag 1765
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 270 acaccattgatgataaggtgggagctgcactttcaatggtttacatatctggagcacctg 211
Query: 1766 tcatgtttgtgggttgcggacagtcctacactgacctcaagaaactcaacgtcaagtcga 1825
||||||||||||| || |||||||| || |||||||| ||||||||||| ||||| || |
Sbjct: 210 tcatgtttgtggggtgtggacagtcttatactgacctgaagaaactcaatgtcaaatcaa 151
Query: 1826 tagtgaaaaccctccttaaatga 1848
||||||| || ||||||||||||
Sbjct: 150 tagtgaagactctccttaaatga 128
Score = 176 bits (89), Expect = 3e-43
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 892 gggaagaagagcaagcctgatgctaaaaagaagggttggttttcctccatgtttcagagt 951
||||| || |||||||||| | |||| | |||||||||||||| |||||||| ||||||
Sbjct: 608 gggaaaaacagcaagcctggtactaagagcaagggttggttttcatccatgttccagagt 549
Query: 952 attgctgggaaggccaatttggagaagtcagacttggagccagctttgaaagctctgaag 1011
|||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||| |||
Sbjct: 548 attgctgggaaggcaaatttagagaagtcggacttggaaccagctttgaaagctcttaag 489
Query: 1012 gataggctcatgactaagaatgtggctgaggaaatagctga 1052
||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 488 gatagactcatgaccaagaacgtggctgaggagatagctga 448