Miyakogusa Predicted Gene
- Lj4g3v1983600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1983600.1 CUFF.50138.1
(1959 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62328 similar to UniRef100_A7PFR5 Cluster: Chromosome... 1223 0.0
gnl|LJGI|FS333798 similar to UniRef100_A7PFR5 Cluster: Chromosom... 789 0.0
gnl|LJGI|TC64938 similar to UniRef100_A7QFZ6 Cluster: Chromosome... 543 e-153
gnl|LJGI|FS327803 similar to UniRef100_A7PFR5 Cluster: Chromosom... 398 e-110
gnl|LJGI|FS354122 similar to UniRef100_Q8H6U2 Cluster: Cyclic nu... 149 8e-35
>gnl|LJGI|TC62328 similar to UniRef100_A7PFR5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1240
Score = 1223 bits (617), Expect = 0.0
Identities = 634/642 (98%)
Strand = Plus / Plus
Query: 1 atgtttgacagcggtcacaaatcagaatacatgggtggccagagggaaacttttttgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtttgacagcggtcacaaatcagaatacatgggtggccagagggaaacttttttgagg 320
Query: 61 ttggatgactttgatcctagactgtctgcatcttctaatgctggagttatgaaatctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggatgactttgatcctagactgtctgcatcttctaatgctggagttatgaaatctgga 380
Query: 121 tttggtattgataaattaagccatggtggtcatggaagcagcccaacctctaggtctttt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttggtattgataagttaagccatggtggtcatggaagcagcccaacctctaggtctttt 440
Query: 181 aaaagaggaatgagaaagggatctgaaggactgaagtcacttggtcggtcacttggattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaagaggaatgagaaagggatctgaaggactgaagtcacttggtcggtcacttggattg 500
Query: 241 ggggtatctagggcggtgttcccggaagatcttaaagtgtcagaaaagaagatatttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggggtatctagggcggtgttcccggaagatcttaaagtgtcagaaaagaagatatttgat 560
Query: 301 cctcaagacaaattcttgctcttattgaacaagttttttgttgtctcatgcattttatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctcaagacaaattcttgctcttattgaacaagttttttgttgtctcatgcattttatct 620
Query: 361 gtgtctgtggatccactgnnnnnnnatctccctgttatcaatgatcgattacactgtctt 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgtctgtggatccactgtttttttatctccctgttatcaatgatcgattacactgtctt 680
Query: 421 ggaatagaccgaaagttggcaacgatagttaccaccttaaggacagtcattgatgctttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaatagaccgaaagttggcaacgatagttaccaccttaaggacagtcattgatgctttc 740
Query: 481 tatcttatacacatggctctccaattccgaactgcttatattgctccgtcatctcgtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatcttatacacatggctctccaattccgaactgcttatattgctccgtcatctcgtgtc 800
Query: 541 tttgggcggggtgagcttgtgatagattcaggacagatagccaggcgatacttgcagcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttgggcggggtgagcttgtgatagattcaggacagatagccaggcgatacttgcagcgg 860
Query: 601 tatttcatcattgatttcctgtctgtggtgccgatacctcag 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tatttcatcattgatttcctgtctgtggtgccgatacctcag 902
>gnl|LJGI|FS333798 similar to UniRef100_A7PFR5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 697
Score = 789 bits (398), Expect = 0.0
Identities = 415/423 (98%)
Strand = Plus / Plus
Query: 1 atgtttgacagcggtcacaaatcagaatacatgggtggccagagggaaacttttttgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atgtttgacagcggtcacaaatcagaatacatgggtggccagagggaaacttttttgagg 334
Query: 61 ttggatgactttgatcctagactgtctgcatcttctaatgctggagttatgaaatctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttggatgactttgatcctagactgtctgcatcttctaatgctggagttatgaaatctgga 394
Query: 121 tttggtattgataaattaagccatggtggtcatggaagcagcccaacctctaggtctttt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 395 tttggtattgataaattaagccatgttggtcatggaagcagcccaacctctaggtctttt 454
Query: 181 aaaagaggaatgagaaagggatctgaaggactgaagtcacttggtcggtcacttggattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aaaagaggaatgagaaagggatctgaaggactgaagtcacttggtcggtcacttggattg 514
Query: 241 ggggtatctagggcggtgttcccggaagatcttaaagtgtcagaaaagaagatatttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggggtatctagggcggtgttcccggaagatcttaaagtgtcagaaaagaagatatttgat 574
Query: 301 cctcaagacaaattcttgctcttattgaacaagttttttgttgtctcatgcattttatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cctcaagacaaattcttgctcttattgaacaagttttttgttgtctcatgcattttatct 634
Query: 361 gtgtctgtggatccactgnnnnnnnatctccctgttatcaatgatcgattacactgtctt 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 635 gtgtctgtggatccactgtttttttatctccctgttatcaatgatcgattacactgtctt 694
Query: 421 gga 423
|||
Sbjct: 695 gga 697
>gnl|LJGI|TC64938 similar to UniRef100_A7QFZ6 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 758
Score = 543 bits (274), Expect = e-153
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1686 cttcaaccgtggttttctaaaagaagctgatttctgtggggaggagcttttaacttgggc 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cttcaaccgtggttttctaaaagaagctgatttctgtggggaggagcttttaacttgggc 61
Query: 1746 cctggaccccagatctggttctaatctcccaacttctactcgaacagtaaaggcattaac 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cctggaccccagatctggttctaatctcccaacttctactcgaacagtaaaggcattaac 121
Query: 1806 agaggttgaggcttttgccttaactgcagatgagttaaaatttgttgcgagtcagtttag 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agaggttgaggcttttgccttaactgcagatgagttaaaatttgttgcgagtcagtttag 181
Query: 1866 gcgccttcacagtagacaggttcaacacactttccgcttttactcgcaacaatggagaac 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcgccttcacagtagacaggttcaacacactttccgcttttactcgcaacaatggagaac 241
Query: 1926 ttgggctgcgtgctttatccaagctgcatggcgt 1959
||||||||||||||||||||||||||||||||||
Sbjct: 242 ttgggctgcgtgctttatccaagctgcatggcgt 275
>gnl|LJGI|FS327803 similar to UniRef100_A7PFR5 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 595
Score = 398 bits (201), Expect = e-110
Identities = 350/402 (87%)
Strand = Plus / Plus
Query: 66 tgactttgatcctagactgtctgcatcttctaatgctggagttatgaaatctggatttgg 125
|||||| ||| |||| || ||| |||||||| |||||||||||| | || ||||||| |
Sbjct: 191 tgacttggattctagcctatcttcatcttctgatgctggagttaaaacatgtggatttag 250
Query: 126 tattgataaattaagccatggtggtcatggaagcagcccaacctctaggtcttttaaaag 185
|||||||||||||||||||||||| | |||||| || || |||||||||||||||||||
Sbjct: 251 tattgataaattaagccatggtggccgtggaagtagtacaccctctaggtcttttaaaag 310
Query: 186 aggaatgagaaagggatctgaaggactgaagtcacttggtcggtcacttggattgggggt 245
|||||||| ||||||||||||||||||||||||| |||| || ||||||||||| |||||
Sbjct: 311 aggaatgaaaaagggatctgaaggactgaagtcaattggccgatcacttggatttggggt 370
Query: 246 atctagggcggtgttcccggaagatcttaaagtgtcagaaaagaagatatttgatcctca 305
||||| ||| || |||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 371 atctaaggctgtattcccggaagatcttaaagtatcagagaagaagatatttgatcctca 430
Query: 306 agacaaattcttgctcttattgaacaagttttttgttgtctcatgcattttatctgtgtc 365
|||||| || |||||||| | ||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 431 agacaagtttttgctcttgtggaacaagctttttgttatctcatgcattttgtctgtgtc 490
Query: 366 tgtggatccactgnnnnnnnatctccctgttatcaatgatcgattacactgtcttggaat 425
||||||||||||| |||||||||| || |||||| ||||| ||||||||| ||
Sbjct: 491 tgtggatccactgtttttttatctccctgtcattaatgattcattactctgtcttggtat 550
Query: 426 agaccgaaagttggcaacgatagttaccaccttaaggacagt 467
|||||| ||||| |||| |||||||||||||| ||||||||
Sbjct: 551 agaccggaagttagcaattatagttaccaccttgaggacagt 592
>gnl|LJGI|FS354122 similar to UniRef100_Q8H6U2 Cluster: Cyclic nucleotide-gated channel
B; n=1; Phaseolus vulgaris|Rep: Cyclic nucleotide-gated
channel B - Phaseolus vulgaris (Kidney bean) (French
bean), partial (95%)
Length = 619
Score = 149 bits (75), Expect = 8e-35
Identities = 108/119 (90%)
Strand = Plus / Minus
Query: 1841 taaaatttgttgcgagtcagtttaggcgccttcacagtagacaggttcaacacactttcc 1900
||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 619 taaaatttgttgccagtcagtttaggcgccttcacagcagacaggttcagcacaccttcc 560
Query: 1901 gcttttactcgcaacaatggagaacttgggctgcgtgctttatccaagctgcatggcgt 1959
|||||||||| ||||||||||| || |||||||| ||||| || ||||| |||||||||
Sbjct: 559 gcttttactcccaacaatggaggacctgggctgcatgcttcattcaagcagcatggcgt 501